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13_1_20cm_2_scaffold_609

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_609_1

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1..1044
DNA (1044bp) protein (348aa)
Putative DNA repair and recombination protein radA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU25_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL94066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radA; DNA repair and recombination protein RadA
13_1_20cm_2_scaffold_609_2

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1153..1452
DNA (300bp) protein (100aa)
50S ribosomal protein L21e n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4C6_9ARCH
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Mari
ribosomal protein L21E
13_1_20cm_2_scaffold_609_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1456..1782
DNA (327bp) protein (109aa)
RNA polymerase Rpb4 n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D248_9ARCH
RNA polymerase Rpb4 Tax=CSP1_1_Thaumarchaeota
RNA polymerase Rpb4
13_1_20cm_2_scaffold_609_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1802..2362
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EWK6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06564.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_20cm_2_scaffold_609_5

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2359..3066
DNA (708bp) protein (236aa)
Ribosomal RNA adenine methylase transferase (KsgA) {ECO:0000313|EMBL:AIF11484.1}; EC=2.1.1.182 {ECO:0000313|EMBL:AIF11484.1};; TaxID=1456176 species="Archaea; Thaumarchaeota; environmental samples.;"
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00035C3D44
ribosomal RNA adenine methylase transferase
13_1_20cm_2_scaffold_609_6
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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3592..4467
DNA (876bp) protein (292aa)
HYR domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6N5_9ARCH
HYR domain protein {ECO:0000313|EMBL:EPA06850.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum l
hypothetical protein
13_1_20cm_2_scaffold_609_7

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comp(4468..5505)
DNA (1038bp) protein (346aa)
Isocitrate/isopropylmalate dehydrogenase (IDH1, IDH2, icd) {ECO:0000313|EMBL:AIE98394.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AIE98394.1};; TaxID=1455970 species="Archaea; Thaumarchaeota; environmental samp
isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00035C2D7B
13_1_20cm_2_scaffold_609_8

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5604..6347
DNA (744bp) protein (248aa)
Metallophosphoesterase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMK1_9ARCH
Metallophosphoesterase {ECO:0000313|EMBL:AIE94884.1}; TaxID=1455924 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_54_E04.;"
Metallophosphoesterase
13_1_20cm_2_scaffold_609_trna_1
unknown

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6398..6481
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_609_9

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6770..6943
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BG62_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07341.1}; TaxID=1456096 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_201_H03.;"
hypothetical protein
13_1_20cm_2_scaffold_609_10

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comp(6933..7754)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU53_9ARCH rbh
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KEQ56724.1}; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarch
hypothetical protein
13_1_20cm_2_scaffold_609_11
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(7751..9082)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUB9_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA93211.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
hypothetical protein
13_1_20cm_2_scaffold_609_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9058..10668)
DNA (1611bp) protein (537aa)
2-alkenal reductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATS8_9ARCH
2-alkenal reductase Tax=CSP1_1_Thaumarchaeota
2-alkenal reductase
13_1_20cm_2_scaffold_609_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10781..11605)
DNA (825bp) protein (275aa)
Putative short chain dehydrogenase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4F0_9ARCH
short-chain dehydrogenase/reductase SDR Tax=CSP1_1_Thaumarchaeota
PF08643 family protein
13_1_20cm_2_scaffold_609_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11666..14176)
DNA (2511bp) protein (837aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ66_9ARCH rbh
DEAD/DEAH box helicase Tax=CSP1_1_Thaumarchaeota
DEAD/DEAH box helicase domain protein
13_1_20cm_2_scaffold_609_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14273..15076
DNA (804bp) protein (268aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJL7_9ARCH
3-beta hydroxysteroid dehydrogenase/isomerase family protein Tax=CSP1_1_Thaumarchaeota
3-beta hydroxysteroid dehydrogenase/isomerase family protein
13_1_20cm_2_scaffold_609_16

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15111..15800
DNA (690bp) protein (230aa)
Putative ubiE/COQ5 methyltransferase family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4F5_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM17681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Methyltransferase type 11
13_1_20cm_2_scaffold_609_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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15772..16941
DNA (1170bp) protein (390aa)
Major facilitator transporter n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BA72_9ARCH rbh
major facilitator transporter Tax=CSP1_1_Thaumarchaeota
transporter, major facilitator family protein
13_1_20cm_2_scaffold_609_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16976..17332
DNA (357bp) protein (119aa)
Sec-independent translocation protein mttA/Hcf106 n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2H5_NITMS
sec-independent translocation protein mttA/Hcf106 Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_609_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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17393..18640
DNA (1248bp) protein (416aa)
gdhA; Glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU24_9ARCH rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_609_20
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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18668..18895
DNA (228bp) protein (76aa)
AsnC family transcriptional regulator n=2 Tax=Nitrosopumilaceae RepID=K0BA15_9ARCH
AsnC family transcriptional regulator {ECO:0000313|EMBL:AFS81296.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopu
AsnC family transcriptional regulator
13_1_20cm_2_scaffold_609_21
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18955..19305)
DNA (351bp) protein (117aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Nitrosopumilaceae RepID=K0B768_9ARCH
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:AFS81334.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus
iron-sulfur cluster assembly accessory protein
13_1_20cm_2_scaffold_609_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19380..20138)
DNA (759bp) protein (253aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKL4_9ARCH rbh
enoyl-CoA hydratase/isomerase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_609_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(20164..22323)
DNA (2160bp) protein (720aa)
Putative CoA-binding domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATQ7_9ARCH
Putative CoA-binding domain protein {ECO:0000313|EMBL:CDI06027.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
CoA-binding domain-containing protein
13_1_20cm_2_scaffold_609_24

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comp(22398..23087)
DNA (690bp) protein (230aa)
GMP synthase glutamine-hydrolyzing protein {ECO:0000313|EMBL:KFM19594.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KFM19594.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine
Glutamine amidotransferase class-I n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2G7_NITMS
class I glutamine amidotransferase
13_1_20cm_2_scaffold_609_25

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23129..23497
DNA (369bp) protein (123aa)
Putative Toprim domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW133O4 RepID=B3T4F9_9ARCH
Toprim domain protein {ECO:0000313|EMBL:KFM14980.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O1
TOPRIM domain-containing protein
13_1_20cm_2_scaffold_609_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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23573..24718
DNA (1146bp) protein (382aa)
dnaG; DNA primase DnaG (EC:2.7.7.-)
Putative toprim sub domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATW2_9ARCH rbh
DNA primase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_609_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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24724..25410
DNA (687bp) protein (229aa)
ribK; Riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4A9_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_609_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(25428..26054)
DNA (627bp) protein (209aa)
Cytidyltransferase-related domain n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATV7_9ARCH
cytidyltransferase-like protein Tax=CSP1_1_Thaumarchaeota
cytidyltransferase-like protein
13_1_20cm_2_scaffold_609_29
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(26084..27130)
DNA (1047bp) protein (349aa)
Diphthine synthase {ECO:0000313|EMBL:EIJ66538.1}; EC=2.1.1.98 {ECO:0000313|EMBL:EIJ66538.1};; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" sour
Diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D495_9ARCH rbh
Displaying items 1-30 of 50 in total

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