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13_1_20cm_2_scaffold_643

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_643_1
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..368)
DNA (366bp) protein (122aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
glcB; malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R4_9CLOT
13_1_20cm_2_scaffold_643_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(388..1704)
DNA (1317bp) protein (439aa)
Isocitrate lyase {ECO:0000313|EMBL:ABG05008.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABG05008.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacter
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC0_RUBXD
13_1_20cm_2_scaffold_643_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1838..3229)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
hypothetical protein
13_1_20cm_2_scaffold_643_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3330..3632)
DNA (303bp) protein (101aa)
Translation initiation factor 1A n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4C5_9ARCH
translation initiation factor IF-1 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor eIF-1A
13_1_20cm_2_scaffold_643_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3707..4231)
DNA (525bp) protein (175aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZNT6_MELRP
thiol-disulfide isomerase or thioredoxin Tax=RBG_16_Archaea_50_20_curated
thioredoxin-like protein
13_1_20cm_2_scaffold_643_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4344..5057
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A9_GEODF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_1_20cm_2_scaffold_643_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5078..5992)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
peroxiredoxin Tax=RBG_16_Archaea_50_20_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_20cm_2_scaffold_643_8
unknown

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6079..6315
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_2_scaffold_643_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(6612..7895)
DNA (1284bp) protein (428aa)
Putative arsenical pump membrane protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT6_NITGG
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Na+/H+ antiporter NhaD-like permease
13_1_20cm_2_scaffold_643_10
unknown

Not on your lists

comp(7981..8373)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_2_scaffold_643_11
unknown

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comp(8934..9248)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_2_scaffold_643_12
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9357..9884)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ANY9_THEM3
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_1_20cm_2_scaffold_643_13
unknown

Not on your lists

10066..10383
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_2_scaffold_643_14
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10442..11602)
DNA (1161bp) protein (387aa)
Threonine synthase {ECO:0000313|EMBL:BAJ64016.1}; EC=4.2.3.1 {ECO:0000313|EMBL:BAJ64016.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;"
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6F2_ANATU
13_1_20cm_2_scaffold_643_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

11680..12027
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=Q8U0V5_PYRFU
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
transcriptional regulator, PadR-like family
13_1_20cm_2_scaffold_643_16
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(12034..12603)
DNA (570bp) protein (190aa)
Putative hydrocarbon binding protein (Contains V4R domain) n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMB0_ACIS0
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:AGB04946.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-3
putative hydrocarbon binding protein (contains V4R domain)
13_1_20cm_2_scaffold_643_17
unknown

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comp(12700..13389)
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_20cm_2_scaffold_643_18
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

13513..13740
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RSG0_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF85705.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
Displaying 18 items

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