ggKbase home page

13_1_20cm_2_scaffold_646

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_646_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..168
DNA (168bp) protein (56aa)
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
Succinyl-CoA ligase [ADP-forming] subunit beta
13_1_20cm_2_scaffold_646_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

165..980
DNA (816bp) protein (272aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
13_1_20cm_2_scaffold_646_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

977..1885
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CBS domain containing protein
13_1_20cm_2_scaffold_646_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1909..2328
DNA (420bp) protein (140aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=GWC2_Gemmatimonadetes_71_10_curated
Nucleoside diphosphate kinase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZE66_9GAMM
nucleoside diphosphate kinase
13_1_20cm_2_scaffold_646_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2363..2872
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X4_GEMAT
hypothetical protein; K07040 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF177
13_1_20cm_2_scaffold_646_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


2886..3065
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL32_GEMAT
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmF; 50S ribosomal protein L32
13_1_20cm_2_scaffold_646_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3067..4074
DNA (1008bp) protein (336aa)
plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT
Phosphate acyltransferase
13_1_20cm_2_scaffold_646_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4071..5057
DNA (987bp) protein (329aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
13_1_20cm_2_scaffold_646_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5105..5992
DNA (888bp) protein (296aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_2_scaffold_646_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6113..6853
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W9_GEMAT
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_20cm_2_scaffold_646_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6885..7136
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACP_GEMAT
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acyl carrier protein
13_1_20cm_2_scaffold_646_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7140..8384
DNA (1245bp) protein (415aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DT05_DESRL
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_1_20cm_2_scaffold_646_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8384..9664
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative menaquinone biosynthesis protein
13_1_20cm_2_scaffold_646_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9661..10482
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W5_GEMAT
hypothetical protein; K07081 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_646_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10485..11528
DNA (1044bp) protein (348aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W4_GEMAT
menaquinone biosynthesis protein
13_1_20cm_2_scaffold_646_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11528..11923
DNA (396bp) protein (132aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Cloacimonetes RepID=B0VG29_CLOAI
5-(carboxyamino)imidazole ribonucleotide mutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_20cm_2_scaffold_646_17

Not on your lists

12020..12487
DNA (468bp) protein (156aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
Bifunctional enzyme IspD/IspF n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZC45_9FIRM
Marine sediment metagenome DNA, contig: S03H2_L01930 {ECO:0000313|EMBL:GAH39815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_20cm_2_scaffold_646_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12484..13086
DNA (603bp) protein (201aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W2_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_2_scaffold_646_19

Not on your lists

comp(13083..14093)
DNA (1011bp) protein (337aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B34645 rbh
Gluconolactonase {ECO:0000313|EMBL:AHZ46187.1}; TaxID=1497526 species="Bacteria; environmental samples.;" source="uncultured bacterium N27-1E.;"
gluconolactonase
13_1_20cm_2_scaffold_646_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14090..14221)
DNA (132bp) protein (44aa)
dehydratase n=1 Tax=Paenibacillus daejeonensis RepID=UPI00035F26A1
Dihydroxy-acid and 6-phosphogluconate dehydratase {ECO:0000313|EMBL:AHG89665.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
dihydroxy-acid and 6-phosphogluconate dehydratase
Displaying 20 items

View Taxonomy