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13_1_20cm_2_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_67_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3..491
DNA (489bp) protein (163aa)
30S ribosomal protein S5 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S2_GEMAT
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWC2_Gemmatimonadetes_71_10_curated
ribosomal protein S5
13_1_20cm_2_scaffold_67_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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484..750
DNA (267bp) protein (89aa)
50S ribosomal protein L30 n=1 Tax=Prevotella sp. CAG:1031 RepID=R5AVG4_9BACT
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ribosomal protein L30
13_1_20cm_2_scaffold_67_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


878..1312
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S4_GEMAT
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplO; 50S ribosomal protein L15
13_1_20cm_2_scaffold_67_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1316..2635
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein translocase subunit SecY
13_1_20cm_2_scaffold_67_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2639..3202
DNA (564bp) protein (188aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Leptospira sp. B5-022 RepID=M6DBZ1_9LEPT
13_1_20cm_2_scaffold_67_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3713..3892
DNA (180bp) protein (60aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=3 Tax=root RepID=D4L6B7_9FIRM
13_1_20cm_2_scaffold_67_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3876..5330)
DNA (1455bp) protein (485aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
13_1_20cm_2_scaffold_67_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5330..6229)
DNA (900bp) protein (300aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1(Or 4)-monophosphatase n=2 Tax=Coxiella burnetii RepID=Q83CI2_COXBU
inositol monophosphatase
13_1_20cm_2_scaffold_67_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6265..7083
DNA (819bp) protein (273aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_20cm_2_scaffold_67_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7083..7754
DNA (672bp) protein (224aa)
MgtC family magnesium (Mg2+) transporter n=1 Tax=Desmospora sp. 8437 RepID=F5SI62_9BACL
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MgtC/SapB transporter
13_1_20cm_2_scaffold_67_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7751..9904
DNA (2154bp) protein (718aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_20cm_2_scaffold_67_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9901..10788
DNA (888bp) protein (296aa)
Putative dihydrodipicolinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T6_GEMAT
putative dihydrodipicolinate synthetase Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrodipicolinate synthetase
13_1_20cm_2_scaffold_67_13
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10785..11669
DNA (885bp) protein (295aa)
Putative M28-family peptidase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3EB57_9ACTO
Putative M28-family peptidase {ECO:0000313|EMBL:EMF30937.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 1
13_1_20cm_2_scaffold_67_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11836..13116
DNA (1281bp) protein (427aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT rbh
13_1_20cm_2_scaffold_67_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13113..15470
DNA (2358bp) protein (786aa)
penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glr1988 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJ44_GLOVI
penicillin amidase
13_1_20cm_2_scaffold_67_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15470..16471
DNA (1002bp) protein (334aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U0_GEMAT
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA {ECO:0000313|EMBL:AHG90345.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
13_1_20cm_2_scaffold_67_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

16791..17873
DNA (1083bp) protein (361aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] Tax=GWA2_Elusimicrobia_69_24_curated
glycerate kinase (EC:2.7.1.31)
Transferase n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3CDC9_STRMB
13_1_20cm_2_scaffold_67_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


17899..19236
DNA (1338bp) protein (446aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT rbh
13_1_20cm_2_scaffold_67_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19248..19946
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTI8_TRURR
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_67_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19939..20244
DNA (306bp) protein (102aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_67_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20291..20755)
DNA (465bp) protein (155aa)
molecular chaperone n=1 Tax=Hippea alviniae RepID=UPI0003B5BE35
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
heat shock protein Hsp20
13_1_20cm_2_scaffold_67_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20939..22054
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37189.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_2_scaffold_67_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22051..22329
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_67_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22362..22601
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_67_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22598..22864
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_67_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22966..23868
DNA (903bp) protein (301aa)
Histone deacetylase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V3_GEMAT
histone deacetylase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Histone deacetylase domain protein
13_1_20cm_2_scaffold_67_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23900..24919
DNA (1020bp) protein (340aa)
Putative dipeptide epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V6_GEMAT
Putative dipeptide epimerase {ECO:0000313|EMBL:BAH37966.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
putative dipeptide epimerase
13_1_20cm_2_scaffold_67_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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24903..27245
DNA (2343bp) protein (781aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=861299 species="Bacteria; G
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
13_1_20cm_2_scaffold_67_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27295..28422
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZV0_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AHG90363.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_2_scaffold_67_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28383..28778
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 72 in total

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