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13_1_20cm_2_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_68_1
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(759..2114)
DNA (1356bp) protein (452aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:BAJ49204.1}; EC=1.1.1.22 {ECO:0000313|EMBL:BAJ49204.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarcha
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000369340A
13_1_20cm_2_scaffold_68_2
unknown

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comp(2468..3043)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_20cm_2_scaffold_68_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4604..5572
DNA (969bp) protein (323aa)
Glycosyltransferase, group 2 family protein (EC:2.4.-.-)
hypothetical protein n=1 Tax=Nitrosopumilus sp. AR RepID=UPI0003754041
glycosyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_68_4
unknown

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5576..7465
DNA (1890bp) protein (630aa)

This feature has no annotations

13_1_20cm_2_scaffold_68_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7661..8803
DNA (1143bp) protein (381aa)
Glycosyltransferase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GIZ7_METTF
Uncharacterized protein {ECO:0000313|EMBL:KKG83646.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
glycosyltransferase
13_1_20cm_2_scaffold_68_6
RHI_OP11_Curtissbacteria_41_17, Curtissbacteria, Microgenomates, Bacteria

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10078..11040
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPHIGHO2_12_FULL_OP11_Curtissbacteria_41_17_curated
galE3; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase (Fragment) n=1 Tax=uncultured bacterium RepID=K2FGL5_9BACT
13_1_20cm_2_scaffold_68_7

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comp(11045..12010)
DNA (966bp) protein (322aa)
UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4S4_9ARCH
Marine sediment metagenome DNA, contig: S06H3_S01787 {ECO:0000313|EMBL:GAI25481.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_68_8

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12035..12385
DNA (351bp) protein (117aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000369340A
Uncharacterized protein {ECO:0000313|EMBL:KGA18985.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
13_1_20cm_2_scaffold_68_9
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13124..14326
DNA (1203bp) protein (401aa)
Predicted glycosyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3A4_PELTS
glycosyl transferase family protein Tax=GWD2_Desulfuromonadales_54_10_curated
glycosyltransferase
13_1_20cm_2_scaffold_68_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14289..16400
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9D1_GEODF
Membrane protein {ECO:0000313|EMBL:ACM18689.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain
hypothetical protein
13_1_20cm_2_scaffold_68_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16550..17545
DNA (996bp) protein (332aa)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Bathyarchaeota_38_9_curated
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_20cm_2_scaffold_68_12
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17542..18543)
DNA (1002bp) protein (334aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured haloarchaeon RepID=A5YSN9_9EURY
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ABQ75996.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="un
Nucleoside-diphosphate-sugar epimerase
13_1_20cm_2_scaffold_68_13

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18620..19543
DNA (924bp) protein (308aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=uncultured archaeon RepID=I3RKT0_9ARCH
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AFK24940.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_20cm_2_scaffold_68_14

Not on your lists

comp(19551..20042)
DNA (492bp) protein (164aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=uncultured archaeon RepID=I3RKT2_9ARCH
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AFK24942.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
cupin
13_1_20cm_2_scaffold_68_15
uncultured marine crenarchaeote E6-3G, Crenarchaeota, Archaea

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comp(20096..21592)
DNA (1497bp) protein (499aa)
Glycosyltransferase n=1 Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAK9_9CREN
Glycosyltransferase {ECO:0000313|EMBL:ADP09425.1}; TaxID=907719 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote E6-
family 2 glycosyl transferase
13_1_20cm_2_scaffold_68_16
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(21733..22185)
DNA (453bp) protein (151aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
Small heat shock protein HSP20 {ECO:0000313|EMBL:AFL66857.1}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
small heat shock protein HSP20
13_1_20cm_2_scaffold_68_17
uncultured Acidilobus sp. CIS, Acidilobus, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

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comp(22332..22826)
DNA (495bp) protein (165aa)
50S ribosomal protein L30P, archaeal n=1 Tax=uncultured Acidilobus sp. CIS RepID=V4LRL0_9CREN
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1410574 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Acidilobaceae; Acidilobus; envir
rpl30p; 50S ribosomal protein L30
13_1_20cm_2_scaffold_68_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(22830..23486)
DNA (657bp) protein (219aa)
30S ribosomal protein S5 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Bathyarchaeota_48_13_curated
30S ribosomal protein S5
13_1_20cm_2_scaffold_68_19
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(23483..24082)
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD8_METFV
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methan
50S ribosomal protein L18
13_1_20cm_2_scaffold_68_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(24086..24514)
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L19e
13_1_20cm_2_scaffold_68_21
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(24511..25032)
DNA (522bp) protein (174aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L315_THEU7
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzon
50S ribosomal protein L32e
13_1_20cm_2_scaffold_68_22

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comp(25035..25613)
DNA (579bp) protein (193aa)
50S ribosomal protein L6 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFW1_PYRYC
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
13_1_20cm_2_scaffold_68_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(25623..25988)
DNA (366bp) protein (122aa)
30S ribosomal protein S8 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS8_PYRHO
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
rps8p; 30S ribosomal protein S8
13_1_20cm_2_scaffold_68_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(26014..26178)
DNA (165bp) protein (55aa)
30S ribosomal protein S14 type Z n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECF8_PYRF1
30S ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S14
13_1_20cm_2_scaffold_68_25
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(26185..26721)
DNA (537bp) protein (179aa)
R-protein L5p (Fragment) n=1 Tax=Candidatus Nitrososphaera gargensis RepID=E0A1G7_9ARCH
rpl5p; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_13_Bathyarchaeota_38_9_curated
LSU ribosomal protein L5P
13_1_20cm_2_scaffold_68_26
Desulfurococcus mucosus, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(26727..27470)
DNA (744bp) protein (248aa)
30S ribosomal protein S4e n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8RAM8_DESM0
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=765177 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococc
30S ribosomal protein S4
13_1_20cm_2_scaffold_68_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(27847..28284)
DNA (438bp) protein (146aa)
50S ribosomal protein L14 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IK69_NITGG
rpl14p; 50S ribosomal protein L14p Tax=RBG_13_Bathyarchaeota_38_9_curated
LSU ribosomal protein L14P
13_1_20cm_2_scaffold_68_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(28284..28619)
DNA (336bp) protein (112aa)
30S ribosomal protein S17P n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RS17_UNCMA
rps17p; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_13_Bathyarchaeota_38_9_curated
rps17p; 30S ribosomal protein S17P
13_1_20cm_2_scaffold_68_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(28613..28888)
DNA (276bp) protein (92aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_16_Euryarchaeota_68_12_curated
Ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] alias=gwa2_scaffold_521_109 id=5044370 tax=GW2011_AR5 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.48_18
ribonuclease P protein component 1 (EC:3.1.26.5)
13_1_20cm_2_scaffold_68_30

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comp(29089..29841)
DNA (753bp) protein (251aa)
30S ribosomal protein S3 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RS3_METTH
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3
Displaying items 1-30 of 41 in total

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