ggKbase home page

13_1_20cm_2_scaffold_7096

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_7096_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..1294)
DNA (1293bp) protein (431aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJA9_9BACT
13_1_20cm_2_scaffold_7096_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1291..1854)
DNA (564bp) protein (188aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_7096_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1851..2030)
DNA (180bp) protein (60aa)
Excisionase/Xis, DNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_7096_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2027..2689)
DNA (663bp) protein (221aa)
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=GWA2_Rokubacteria_73_35_curated
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA2_9BACT rbh
13_1_20cm_2_scaffold_7096_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2692..3063)
DNA (372bp) protein (124aa)
FeS cluster assembly scaffold protein NifU n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGR4_9FIRM
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
FeS cluster assembly scaffold protein NifU
13_1_20cm_2_scaffold_7096_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3060..4217)
DNA (1158bp) protein (386aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
cysteine desulfurase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4608A
13_1_20cm_2_scaffold_7096_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4259..4582
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B046
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_7096_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4587..4943
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P976_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_7096_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4943..5167
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_7096_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5191..5394)
DNA (204bp) protein (68aa)
Lfe121p7 n=1 Tax=Leptospirillum ferrooxidans RepID=Q7X1K5_9BACT
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_7096_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5391..5594)
DNA (204bp) protein (68aa)
fdx; ferredoxin, 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_7096_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5649..7478)
DNA (1830bp) protein (610aa)
Chaperone protein HscA (Hsc66) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P865_9BACT
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hscA; chaperone protein HscA
13_1_20cm_2_scaffold_7096_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7456..8058)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F9D28
hscB; co-chaperone protein HscB; K04082 molecular chaperone HscB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hscB; co-chaperone protein HscB
13_1_20cm_2_scaffold_7096_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8126..8455)
DNA (330bp) protein (110aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P863_9BACT
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iscA; iron-sulfur cluster assembly protein IscA
13_1_20cm_2_scaffold_7096_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8476..8886)
DNA (411bp) protein (137aa)
FeS cluster assembly scaffold IscU n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E73A7
FeS cluster assembly scaffold IscU Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
iscU; iron-sulfur cluster assembly protein IscU
13_1_20cm_2_scaffold_7096_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8900..9436)
DNA (537bp) protein (179aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P861_9BACT
Displaying 16 items

View Taxonomy