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13_1_20cm_2_scaffold_774

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_774_1
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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2..1819
DNA (1818bp) protein (606aa)
Sodium/hydrogen exchanger n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWN3_9BACT
sodium/hydrogen exchanger family/TrkA domain protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
potassium transporter KefB
13_1_20cm_2_scaffold_774_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1826..2176)
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_774_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2470..4044)
DNA (1575bp) protein (525aa)
Mg chelatase-related chaperone ATPase; K07391 magnesium chelatase family protein Tax=CSP1_2_Dadabacteria
Putative chaperone alias=gwe2_scaffold_8_833 id=2167989 tax=TA06 species=Ignavibacterium album JCM 16511 genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
comM; competence ATPase ComM
13_1_20cm_2_scaffold_774_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

4085..5224
DNA (1140bp) protein (380aa)
Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter sulfurreducens RepID=D7AJ40_GEOSK
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWC2_Nitrospirae_57_13_curated
RND family efflux pump membrane fusion lipoprotein
13_1_20cm_2_scaffold_774_5
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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5221..8310
DNA (3090bp) protein (1030aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein
13_1_20cm_2_scaffold_774_6
unknown

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comp(8311..9822)
DNA (1512bp) protein (504aa)

This feature has no annotations

13_1_20cm_2_scaffold_774_7
unknown

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comp(9824..10477)
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_20cm_2_scaffold_774_8
unknown

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comp(10868..11527)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_2_scaffold_774_9
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11649..11987
DNA (339bp) protein (113aa)
Chaperonin csaA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYJ3_9RHOB
Chaperonin csaA {ECO:0000313|EMBL:EAV42189.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain
export-related chaperone CsaA
13_1_20cm_2_scaffold_774_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11907..12947)
DNA (1041bp) protein (347aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLA7_9FIRM
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_2_scaffold_774_11
unknown

Not on your lists

comp(13176..13712)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_20cm_2_scaffold_774_12
unknown

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comp(13723..15081)
DNA (1359bp) protein (453aa)

This feature has no annotations

13_1_20cm_2_scaffold_774_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(15177..16577)
DNA (1401bp) protein (467aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component histidine kinase
13_1_20cm_2_scaffold_774_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16574..19138)
DNA (2565bp) protein (855aa)
putative two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
histidine kinase HAMP region domain protein
13_1_20cm_2_scaffold_774_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19852..20523
DNA (672bp) protein (224aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_774_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20608..22116
DNA (1509bp) protein (503aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
13_1_20cm_2_scaffold_774_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

22136..23458
DNA (1323bp) protein (441aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated
efflux transporter, RND family, MFP subunit
13_1_20cm_2_scaffold_774_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23455..24186
DNA (732bp) protein (244aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_774_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24187..25425
DNA (1239bp) protein (413aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_20cm_2_scaffold_774_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25429..25854
DNA (426bp) protein (142aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90437.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_774_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25851..26600
DNA (750bp) protein (250aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADD8_GEMAT
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90435.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_774_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26603..26749
DNA (147bp) protein (49aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H3_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
Displaying 22 items

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