ggKbase home page

13_1_20cm_2_scaffold_794

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_794_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1..570
DNA (570bp) protein (190aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6N3_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_1_20cm_2_scaffold_794_2
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1133..2650
DNA (1518bp) protein (506aa)
Peptidase A4 family protein {ECO:0000313|EMBL:AKB47749.1}; EC=3.4.23.19 {ECO:0000313|EMBL:AKB47749.1};; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
Peptidase A4 family protein (EC:3.4.23.19)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QU82_VULDI
13_1_20cm_2_scaffold_794_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2819..3373
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B1FSZ0_9BURK alias=ACD41_C00066G00005,ACD41_66893.4298.7_5,ACD41_66893.4298.7G0005 id=53324 tax=ACD41 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_794_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3463..5886)
DNA (2424bp) protein (808aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038272B0
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative ABC-type dipeptide transport system, periplasmic component
13_1_20cm_2_scaffold_794_5
unknown

Not on your lists

comp(6187..8352)
DNA (2166bp) protein (722aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_6
unknown

Not on your lists

comp(8600..9544)
DNA (945bp) protein (315aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_7
unknown

Not on your lists

comp(9667..10632)
DNA (966bp) protein (322aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10763..12316)
DNA (1554bp) protein (518aa)
ABC transporter, permease protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAJ1_ACIB4
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
binding-protein-dependent transport systems inner membrane component
13_1_20cm_2_scaffold_794_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12313..13473)
DNA (1161bp) protein (387aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LIF4_9EURY
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_20cm_2_scaffold_794_10
unknown

Not on your lists

comp(13428..16052)
DNA (2625bp) protein (875aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_11
unknown

Not on your lists

comp(16174..17574)
DNA (1401bp) protein (467aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17766..22235)
DNA (4470bp) protein (1490aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_794_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22335..23999)
DNA (1665bp) protein (555aa)
PKD domain containing protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKT6_NAKMY
PKD domain containing protein {ECO:0000313|EMBL:ACV80743.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella mult
PKD domain-containing protein
13_1_20cm_2_scaffold_794_14
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24409..25836
DNA (1428bp) protein (476aa)
Periplasmic copper-binding protein NosD n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9SXZ0_PAEAL
Periplasmic copper-binding protein NosD {ECO:0000313|EMBL:EPY10722.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei
fibronectin type III domain-containing protein
13_1_20cm_2_scaffold_794_15
unknown

Not on your lists

comp(25924..26418)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_2_scaffold_794_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(26942..28522)
DNA (1581bp) protein (527aa)
Putative cysteine synthase {ECO:0000313|EMBL:AIC16006.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AIC16006.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
cysM1; putative cysteine synthase (EC:2.5.1.47)
Putative cysteine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I761_NITGG
13_1_20cm_2_scaffold_794_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

28565..28906
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DII7_9EURY
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_794_18

Not on your lists

29047..29268
DNA (222bp) protein (74aa)
AbrB family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T1BL45_9ZZZZ
AbrB family transcriptional regulator {ECO:0000313|EMBL:EQD73676.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AbrB family transcriptional regulator
13_1_20cm_2_scaffold_794_19

Not on your lists

29412..29636
DNA (225bp) protein (75aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T0YCJ7_9ZZZZ
PilT domain-containing protein {ECO:0000313|EMBL:EQD30843.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PilT domain-containing protein
13_1_20cm_2_scaffold_794_20
unknown

Not on your lists

comp(29686..30792)
DNA (1107bp) protein (369aa)

This feature has no annotations

Displaying 20 items

View Taxonomy