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13_1_20cm_2_scaffold_839

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_839_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1584)
DNA (1584bp) protein (528aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_839_2
unknown

Not on your lists

1686..2030
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_2_scaffold_839_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1958..2404)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035FC3C1
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_20cm_2_scaffold_839_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2439..3233)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003720FAF
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mrp; putative ATPase
13_1_20cm_2_scaffold_839_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3355..3849
DNA (495bp) protein (165aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transcription elongation factor GreA/GreB domain-containing protein
13_1_20cm_2_scaffold_839_6
unknown

Not on your lists

comp(3846..4430)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_2_scaffold_839_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4427..5023)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured prokaryote RepID=H5S8U6_9ZZZZ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_839_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5106..5771
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035EB63D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_20cm_2_scaffold_839_9
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

5785..6606
DNA (822bp) protein (274aa)
Methyltransferase type 11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6X1_9CHLR
methyltransferase type 11 Tax=CSP1_3_Armatimonadetes
putative SAM-dependent methyltransferase
13_1_20cm_2_scaffold_839_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6631..7899)
DNA (1269bp) protein (423aa)
Biotin carboxylase-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKM8_ANADE
biotin carboxylase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
biotin carboxylase-like
13_1_20cm_2_scaffold_839_11
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(7910..8527)
DNA (618bp) protein (206aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
Nitrogen fixation protein NifU {ECO:0000313|EMBL:BAL58152.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
thioredoxin-like protein
13_1_20cm_2_scaffold_839_12
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8588..10519)
DNA (1932bp) protein (644aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6EB3C
13_1_20cm_2_scaffold_839_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10468..10830)
DNA (363bp) protein (121aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
metE1; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (methionine synthase II) (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD5_9BACT
13_1_20cm_2_scaffold_839_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10946..11626)
DNA (681bp) protein (227aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_839_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11623..12279)
DNA (657bp) protein (219aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LU03_DESBD
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
glycoside hydrolase family 13
13_1_20cm_2_scaffold_839_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12276..12827)
DNA (552bp) protein (184aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_839_17
unknown

Not on your lists

13073..13426
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_2_scaffold_839_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13556..14638
DNA (1083bp) protein (361aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_839_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14749..17577)
DNA (2829bp) protein (943aa)
TonB-dependent receptor, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWL9_RHOCS
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TonB-dependent receptor
13_1_20cm_2_scaffold_839_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..19130)
DNA (1422bp) protein (474aa)
Putative lipoprotein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C891_MYXFH
Starch-binding protein {ECO:0000313|EMBL:AKF82533.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
putative lipoprotein
13_1_20cm_2_scaffold_839_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19235..22072)
DNA (2838bp) protein (946aa)
Putative outer membrane protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TB0_STIAD
Putative outer membrane protein {ECO:0000313|EMBL:EAU63723.1}; TonB-dependent receptor {ECO:0000313|EMBL:ADO75923.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
TonB-dependent receptor
13_1_20cm_2_scaffold_839_22
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22277..22870)
DNA (594bp) protein (198aa)
Putative amino acid transporter n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6J9_ACIC5
Putative amino acid transporter {ECO:0000313|EMBL:ACO33675.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (
cat; amino acid transporter
Displaying 22 items

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