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13_1_20cm_2_scaffold_853

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_853_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..1159
DNA (1158bp) protein (386aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
secA; preprotein translocase SecA subunit
13_1_20cm_2_scaffold_853_2
unknown

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comp(1214..1741)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_20cm_2_scaffold_853_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1910..2596
DNA (687bp) protein (229aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadC
13_1_20cm_2_scaffold_853_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2593..4776
DNA (2184bp) protein (728aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:BAH38997.1}; EC=2.7.6.5 {ECO:0000313|EMBL:BAH38997.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" s
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
13_1_20cm_2_scaffold_853_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4788..6803
DNA (2016bp) protein (672aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uvrB; UvrABC system protein B
13_1_20cm_2_scaffold_853_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6766..7185
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative protein family UPF0079, ATPase
13_1_20cm_2_scaffold_853_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7182..7880
DNA (699bp) protein (233aa)
Peptidase M22, glycoprotease n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IVZ7_9FIRM
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
universal protein YeaZ
13_1_20cm_2_scaffold_853_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7900..8292
DNA (393bp) protein (131aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVR3_PSEUU
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal-protein-alanine acetyltransferase
13_1_20cm_2_scaffold_853_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8395..8874
DNA (480bp) protein (160aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ssb; single-strand binding protein
13_1_20cm_2_scaffold_853_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8846..10114
DNA (1269bp) protein (423aa)
Peptidoglycan-binding LysM alias=gwe2_scaffold_117_131 id=1770346 tax=TA06 species=Geobacter uraniireducens Rf4 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
Uncharacterized protein with LysM domain
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_853_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10134..10952
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000381D912
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ResC/HemX-like cytochrome c biogenesis membrane protein
13_1_20cm_2_scaffold_853_12
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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10949..12235
DNA (1287bp) protein (429aa)
Glutamyl-tRNA reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3J0_9FIRM
glutamyl-tRNA reductase
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_1_20cm_2_scaffold_853_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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12232..13221
DNA (990bp) protein (330aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-galactose 4-epimerase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI66_CHLTF rbh
UDP-glucose-4-epimerase Tax=GWC2_RIF_CHLX_73_18_curated
13_1_20cm_2_scaffold_853_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13318..13899
DNA (582bp) protein (194aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G2_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_20cm_2_scaffold_853_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13899..14342
DNA (444bp) protein (148aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G1_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative biopolymer transport protein
13_1_20cm_2_scaffold_853_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14401..14952
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G0_GEMAT
Putative periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB domain-containing protein
13_1_20cm_2_scaffold_853_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14949..16016
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F9_GEMAT
hypothetical protein; K03641 TolB protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying 17 items

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