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13_1_20cm_2_scaffold_8886

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8886_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1194)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003776172
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sigma-54-dependent transcriptional response regulator
13_1_20cm_2_scaffold_8886_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1342..2277)
DNA (936bp) protein (312aa)
menaquinol oxidoreductase complex ACIII cytochrome C subunit ActA n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B49193
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_20cm_2_scaffold_8886_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2279..2548)
DNA (270bp) protein (90aa)
Putative lipoprotein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHB5_9BACT
lipoprotein Tax=GWA2_Rokubacteria_73_35_curated
lipoprotein
13_1_20cm_2_scaffold_8886_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3466..3696
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_8886_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3700..4767)
DNA (1068bp) protein (356aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64)
Processing protease n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G8V1_9CYAN
13_1_20cm_2_scaffold_8886_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4914..6329)
DNA (1416bp) protein (472aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-); K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
M16B family peptidase (EC:3.4.24.-)
Peptidase M16 inactive domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYB2_9DELT
13_1_20cm_2_scaffold_8886_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6373..7617)
DNA (1245bp) protein (415aa)
Phosphonoacetate hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX18_ALIDB
phosphonoacetate hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphonoacetate hydrolase
13_1_20cm_2_scaffold_8886_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7631..8314)
DNA (684bp) protein (228aa)
Heme-molybdoenzyme heme-containing subunit YedZ cytochrome b subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKN4_9BACT
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit
13_1_20cm_2_scaffold_8886_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8572..9207)
DNA (636bp) protein (212aa)
Exported heme-molybdoenzyme molybdopterin-containing subunit YedY TAT export n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKN5_9BACT
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export
13_1_20cm_2_scaffold_8886_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9502..10182)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003814FA1
OmpR family response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
two component transcriptional regulator, winged helix family
13_1_20cm_2_scaffold_8886_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10175..11698)
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000382122D
sensor histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_8886_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11707..12018)
DNA (312bp) protein (104aa)
ccdA; cytochrome c biogenesis protein CcdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytochrome c biogenesis protein alias=ACD41_C00162G00003,ACD41_180444.3575.6G0003,ACD41_180444.3575.6_3 id=54029 tax=ACD41 species=Legionella longbeachae genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
thiol-disulfide isomerase
13_1_20cm_2_scaffold_8886_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12034..12231)
DNA (198bp) protein (66aa)
thioredoxin n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037B4A64
Putative thioredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_8886_14
unknown

Not on your lists

comp(12234..12518)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_2_scaffold_8886_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12661..13899)
DNA (1239bp) protein (413aa)
Sugar phosphate permease n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4X0_DESTA
sugar phosphate permease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sugar phosphate permease
13_1_20cm_2_scaffold_8886_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13896..14180)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TAN3_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_8886_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14180..14470)
DNA (291bp) protein (97aa)
id=4895587 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 17 items

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