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13_1_20cm_2_scaffold_901

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_901_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..344
DNA (342bp) protein (114aa)
Predicted regulator of Ras-like GTPase activity, member of the Roadblock/LC7/MglB family n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYS6_METKA
Ras-like GTPase activity regulator; K07131
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_901_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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341..811
DNA (471bp) protein (157aa)
Roadblock/LC7 family protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAL7_THEID
Roadblock/LC7 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Roadblock/LC7 family protein
13_1_20cm_2_scaffold_901_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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817..1416
DNA (600bp) protein (200aa)
gliding motility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ARF/SAR superfamily protein
Mutual gliding-motility protein MglA alias=gwe2_scaffold_136_123 id=1798755 tax=TA06 species=Myxococcales genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_2_scaffold_901_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1413..3332
DNA (1920bp) protein (640aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A893_GEMAT
DnaA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DnaA family protein
13_1_20cm_2_scaffold_901_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3332..4948
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A894_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_901_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4945..5556
DNA (612bp) protein (204aa)
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal {ECO:0000313|EMBL:AHG90599.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal
MCP methyltransferase, CheR-type alias=gwe2_scaffold_136_126 id=1798764 tax=TA06 species=Methanosalsum zhilinae DSM 4017 genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
13_1_20cm_2_scaffold_901_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5531..5773
DNA (243bp) protein (81aa)
MCP methyltransferase, CheR-type (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MCP methyltransferase, CheR-type n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8N6_METFA
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal
13_1_20cm_2_scaffold_901_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5770..6267
DNA (498bp) protein (166aa)
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIB5_DESK7
13_1_20cm_2_scaffold_901_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6251..7384
DNA (1134bp) protein (378aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemm
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A896_GEMAT
13_1_20cm_2_scaffold_901_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7381..7788
DNA (408bp) protein (136aa)
Putative CheW protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GCM8_DESGI
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
chemotaxis protein CheW
13_1_20cm_2_scaffold_901_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7785..8327
DNA (543bp) protein (181aa)
CheW protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JEU3_DESDE
cheW2; chemotaxis protein Chew Tax=GWC2_Gemmatimonadetes_71_10_curated
CheW protein
13_1_20cm_2_scaffold_901_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8327..9193
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A898_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_901_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9244..10065
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A899_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_901_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10100..10285
DNA (186bp) protein (62aa)
Putative uncharacterized protein alias=RBG1_1898,RBG1_C00001G01898 id=1251456 tax=RBG1 species=Candidatus Cloacamonas acidaminovorans genus=Candidatus Cloacamonas taxon_order=unknown taxon_class=unknown phylum=unknown
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_901_trna_1
unknown

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10304..10377
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_901_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10413..12215
DNA (1803bp) protein (601aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_901_trna_2
unknown

Not on your lists

12264..12337
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_901_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12463..13398
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_0100
mraW; putative S-adenosyl-methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSMH_GEMAT
13_1_20cm_2_scaffold_901_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13382..15658
DNA (2277bp) protein (759aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A4_GEMAT rbh
penicillin-binding protein transpeptidase
13_1_20cm_2_scaffold_901_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15655..17112
DNA (1458bp) protein (486aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWC2_Gemmatimonad
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A5_GEMAT
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
13_1_20cm_2_scaffold_901_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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17109..18449
DNA (1341bp) protein (447aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A6_GEMAT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
13_1_20cm_2_scaffold_901_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18473..19591
DNA (1119bp) protein (373aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MRAY_GEMAT
13_1_20cm_2_scaffold_901_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19588..20946
DNA (1359bp) protein (453aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A8_GEMAT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_1_20cm_2_scaffold_901_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20943..22088
DNA (1146bp) protein (382aa)
Cell division protein FtsW n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A9_GEMAT
ftsW; cell division protein FtsW; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell cycle protein
13_1_20cm_2_scaffold_901_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22192..23277
DNA (1086bp) protein (362aa)
murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B0_GEMAT
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
13_1_20cm_2_scaffold_901_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23329..24735
DNA (1407bp) protein (469aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B1_GEMAT rbh
UDP-N-acetylmuramate--L-alanine ligase
13_1_20cm_2_scaffold_901_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24735..25460
DNA (726bp) protein (242aa)
Putative cell division protein FtsQ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B2_GEMAT
ftsQ; putative cell division protein FtsQ; K03589 cell division protein FtsQ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Polypeptide-transport-associated domain protein FtsQ-type
13_1_20cm_2_scaffold_901_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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25457..26650
DNA (1194bp) protein (398aa)
Cell division protein ftsA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B3_GEMAT
ftsA; cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division protein FtsA
13_1_20cm_2_scaffold_901_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26673..27833
DNA (1161bp) protein (387aa)
Cell division protein FtsZ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C1_GEMAT
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division protein FtsZ
13_1_20cm_2_scaffold_901_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27833..29125
DNA (1293bp) protein (431aa)
Peptidase M23B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C2_GEMAT
peptidase M23B family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M23B family protein
Displaying items 1-30 of 37 in total

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