ggKbase home page

13_1_20cm_2_scaffold_1180_10

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6217..6921)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RB40_METFO similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 220.0
  • Bit_score: 207
  • Evalue 1.60e-50
KH domain containing protein; K03679 exosome complex component RRP4 Tax=RBG_16_Archaea_50_20_curated UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 223.0
  • Bit_score: 277
  • Evalue 2.30e-71
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 220.0
  • Bit_score: 207
  • Evalue 4.50e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 705
TTGGTCCTCGTCGCAGAACCGAAGCAAGTAGTGGCTCCCGGAGAGCTTCTTGCAGAAGGCGATCATCTTCTTGGCGACAACGCGTACAAGATCGGTACTCAGATATTTTCGGCTTGCATTGGGATCCTGGAAGTGGACGGAAACAGAGTCTTCGTTGTCCCACTAAAGGGCGGTTACTTTCCACATGCTGGCGATCTAGTCGGCGGTCGAATAGTCGACATCGGATTGTCCGGATGGTCTGTAGACATTCGTGCACCTTACGAGGCAATGCTGCCTGCGTCTGAGACACCGGGCCCAAGAGGGCCAAGGCGGCGAGATCTTTCCTCCAGCTTCGATGTAGGAGATATGGTGTTAGCAGAAGTACTCGATTTTGATCGAACCAGAGATCCGCTCCTCACGGCAAAAGGTCCCGGGCTGGGAAAAGTATCAACTGGTAGGGTCGTCGAGATTAGCGCCGCTAAGATCCCACGTCTAATCGGGAGAAAAGGCTCCATGATCAGTATGCTCAAGCAGGAGACCCGATGCCAGATTACCGTAGGGCAGAACGGCGTCGTGCTCGTCTGGGGCAAGTCCCCAGAGGACGAGCGAGTCGCGGTAGAAGCCATATACATGGTTGAACGTGAGGCGCATACAAGAGGACTGACCGACCGGATAAGGGAAATGTGCGGATCGATGGCCGCCGCTTGGACCAATTGCGGCCTTTGA
PROTEIN sequence
Length: 235
LVLVAEPKQVVAPGELLAEGDHLLGDNAYKIGTQIFSACIGILEVDGNRVFVVPLKGGYFPHAGDLVGGRIVDIGLSGWSVDIRAPYEAMLPASETPGPRGPRRRDLSSSFDVGDMVLAEVLDFDRTRDPLLTAKGPGLGKVSTGRVVEISAAKIPRLIGRKGSMISMLKQETRCQITVGQNGVVLVWGKSPEDERVAVEAIYMVEREAHTRGLTDRIREMCGSMAAAWTNCGL*