ggKbase home page

13_1_20cm_2_scaffold_122_2

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(279..788)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Rpb6 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASV0_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 170.0
  • Bit_score: 166
  • Evalue 2.20e-38
RNA polymerase Rpb6 Tax=CSP1_1_Thaumarchaeota UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 166.0
  • Bit_score: 175
  • Evalue 8.90e-41
RNA polymerase Rpb6 similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 183.0
  • Bit_score: 154
  • Evalue 2.50e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 510
ATGCTGATGTCTGACGAGCCTGAGGAAGTTGGTGCAGAGACAGAAGAGGCCGCACCAGAGGAGGAAGCGCCACTTTTAGCACCACAAGTAACTGAAACTACCGAAGTCCTTACTGAAGAAGAGGAAGCTAAACCGGTAGTTAAGAAAGGAAAGAAAGAACAATCTCCTGAAGATATTGCAGAGCAAGAAAGACTACAGAAAATTATTGCTGCAAGAGAAGTAATAGAAGTTGATCCTATCCATGTACCTGTAGAGTACGAAACTACCGGAAGAGGGAAGATAATGATAGGACCCCCCACACTTACACGCTTTGAAAAGGCAAGGATACTTGGAGCTAGAGCATTACAACTTTCACTTGGCGCGCCACCATTCATATCAGTCCCAAAAGAAGTTGCAACATCGCTCGATCTTGCTTATGCAGAACTTGAAAAACGTGTTATTCCAATTACAATAAGAAGAGTTCTACCAAACGGTGACTTCCAAAATATCCCCATCGATCTTTTTGACTGA
PROTEIN sequence
Length: 170
MLMSDEPEEVGAETEEAAPEEEAPLLAPQVTETTEVLTEEEEAKPVVKKGKKEQSPEDIAEQERLQKIIAAREVIEVDPIHVPVEYETTGRGKIMIGPPTLTRFEKARILGARALQLSLGAPPFISVPKEVATSLDLAYAELEKRVIPITIRRVLPNGDFQNIPIDLFD*