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13_1_20cm_2_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_122_1
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2..223)
DNA (222bp) protein (74aa)
DNA/RNA-binding protein AlbA n=2 Tax=Nitrosopumilus RepID=K0BEV4_9ARCH
DNA/RNA-binding protein AlbA {ECO:0000313|EMBL:AFS82846.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp.
DNA/RNA-binding protein AlbA
13_1_20cm_2_scaffold_122_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(279..788)
DNA (510bp) protein (170aa)
RNA polymerase Rpb6 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASV0_9ARCH
RNA polymerase Rpb6 Tax=CSP1_1_Thaumarchaeota
RNA polymerase Rpb6
13_1_20cm_2_scaffold_122_3

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834..1220
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D3T3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL89221.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_122_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1205..1519)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI0003706293
30S ribosomal protein S25 Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S25e
13_1_20cm_2_scaffold_122_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1601..1888
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASV7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05801.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_20cm_2_scaffold_122_6
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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1926..3692
DNA (1767bp) protein (589aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
lig; DNA ligase (EC:6.5.1.1)
DNA ligase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B9Y6_9ARCH rbh
13_1_20cm_2_scaffold_122_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3769..4422
DNA (654bp) protein (218aa)
Coiled-coil protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXF9_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_122_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4519..5037
DNA (519bp) protein (173aa)
endA; tRNA-intron endonuclease (EC:4.6.1.16)
tRNA intron endonuclease n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJR1_9ARCH
tRNA intron endonuclease Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_122_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5017..5469)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141M12 RepID=B3T5W2_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_122_10
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5412..5648)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6E3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFS81044.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
hypothetical protein
13_1_20cm_2_scaffold_122_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5746..7533
DNA (1788bp) protein (596aa)
Rossmann-fold oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT34_9ARCH rbh
Rossmann-fold oxidoreductase {ECO:0000313|EMBL:CDI05807.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Oxidoreductase, short chain dehydrogenase/reductase family protein
13_1_20cm_2_scaffold_122_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7645..8346)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003753755
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_122_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8477..9136)
DNA (660bp) protein (220aa)
Extracellular protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXG7_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
Extracellular protein
13_1_20cm_2_scaffold_122_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9217..10230
DNA (1014bp) protein (338aa)
hom; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4L0_9ARCH rbh
homoserine dehydrogenase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_122_15

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10227..10700
DNA (474bp) protein (158aa)
Putative domain 2 n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D153_9ARCH
PUA domain-containing protein {ECO:0000313|EMBL:AIF15451.1}; TaxID=1456252 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_D07.;"
PUA domain-containing protein
13_1_20cm_2_scaffold_122_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10701..11279)
DNA (579bp) protein (193aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta 1 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARZ9_9ARCH
putative proteasome endopeptidase complex, beta subunit
13_1_20cm_2_scaffold_122_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11394..12749)
DNA (1356bp) protein (452aa)
Putative peptidase M20 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDX3_NITGG rbh
Putative peptidase M20 {ECO:0000313|EMBL:AFU59581.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera g
peptidase M20
13_1_20cm_2_scaffold_122_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12756..13616)
DNA (861bp) protein (287aa)
nnrD; ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC:4.2.1.136)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG7F19 RepID=B3T9N1_9ARCH rbh
carbohydrate kinase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_122_19
uncultured marine crenarchaeote HF4000_APKG3K8, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13625..14584)
DNA (960bp) protein (320aa)
Putative methyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3K8 RepID=B3T7W2_9ARCH
Putative methyltransferase {ECO:0000313|EMBL:ABZ08671.1}; TaxID=455588 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG3
tRNA methyltransferase complex GCD14 subunit
13_1_20cm_2_scaffold_122_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14791..16668)
DNA (1878bp) protein (626aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Putative Arginyl-tRNA synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS74_9ARCH rbh
arginyl-tRNA synthetase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_122_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16673..17368)
DNA (696bp) protein (232aa)
Phosphoglycolate phosphatase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EV15_9ARCH
SPP-like hydrolase Tax=CSP1_1_Thaumarchaeota
SPP-like hydrolase
13_1_20cm_2_scaffold_122_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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17658..18758
DNA (1101bp) protein (367aa)
Putative GTPase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARY7_9ARCH
Putative GTPase {ECO:0000313|EMBL:CDI05427.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
small GTP-binding protein
13_1_20cm_2_scaffold_122_23
unknown

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18792..19001
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_122_24
unknown

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comp(19048..19239)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_2_scaffold_122_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19248..19532)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARR8_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_122_26
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19573..20928)
DNA (1356bp) protein (452aa)
Collagen triple helix repeat protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D215_9ARCH rbh
Collagen triple helix repeat {ECO:0000313|EMBL:ABX12578.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (stra
collagen type XI alpha 2
13_1_20cm_2_scaffold_122_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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21056..22195
DNA (1140bp) protein (380aa)
Tetratricopeptide repeat protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1Y9_9ARCH rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_20cm_2_scaffold_122_28

Not on your lists

comp(22199..22981)
DNA (783bp) protein (261aa)
Rhodanese domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVY5_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK60847.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Sulfurtransferase
13_1_20cm_2_scaffold_122_29
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(22996..24801)
DNA (1806bp) protein (602aa)
sir; putative ferredoxin-dependent sulfite reductase (EC:1.8.7.1)
Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D211_9ARCH rbh
sulfite reductase ferredoxin Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_122_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24981..25994
DNA (1014bp) protein (338aa)
Putative myo-inositol-1-phosphate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW3_NITGG rbh
Putative myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:AFU59095.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
myo-inositol-1-phosphate synthase
Displaying items 1-30 of 59 in total

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