ggKbase home page

13_1_20cm_2_scaffold_1916_13

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 8664..9122

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CQ41_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 170.0
  • Bit_score: 109
  • Evalue 2.20e-21
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_6_Rokubacteria UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 154.0
  • Bit_score: 172
  • Evalue 5.20e-40
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 170.0
  • Bit_score: 108
  • Evalue 1.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGACGAACGCTCGTTCGCCCGCGCCACCGAGGAATACGCCGCCCGACTCTACAGGGTGGCGTATCGGCTCCTCGGCAACCGGGCCGACGCGGAGGACGCCGTCCAGAGGGCCCTGCTGAAGGCCTTCGAGGCGCGGGAGTCCTACGCCCCGCGGTGGGCGCTCTCCACGTGGCTCTATCGCGTGCTCACGAACGTCTGCATCGACGAGCTTCGCCGGCGCCGGCGCGCGCCGCCCGAGCCGCTCCCCCGCGGGCAGACCGGGACGTCGGTCGAGCGGGTGGATCTCGCGCGGGCGCTCGACACCGTGCCTCGCGAAGCGCGTGTGCTGCTGGCGCTCCACTACGTGAACGGGCTCTCGTATCGGGAGCTCGCGACGATCAGGGGAATCTCGGTCAACACGGTCAAGAGTCAGCTCGCGCGGGGCAAGGCAATCTTGAAACAAGCCCTGGAGGGATAG
PROTEIN sequence
Length: 153
MDERSFARATEEYAARLYRVAYRLLGNRADAEDAVQRALLKAFEARESYAPRWALSTWLYRVLTNVCIDELRRRRRAPPEPLPRGQTGTSVERVDLARALDTVPREARVLLALHYVNGLSYRELATIRGISVNTVKSQLARGKAILKQALEG*