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13_1_20cm_2_scaffold_1916

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1916_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..555)
DNA (555bp) protein (185aa)
Putative hydrolase (HAD superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5S3_UNCMA
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD family hydrolase
13_1_20cm_2_scaffold_1916_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(552..1328)
DNA (777bp) protein (259aa)
echA8_3; enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA76_9BRAD
13_1_20cm_2_scaffold_1916_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1328..1645)
DNA (318bp) protein (106aa)
Molybdopterin biosynthesis protein MoeB n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z1_9ARCH
rhodanese-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
molybdopterin biosynthesis protein MoeB
13_1_20cm_2_scaffold_1916_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1657..2508)
DNA (852bp) protein (284aa)
Alpha/beta hydrolase fold protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T968_MYCVP
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_1916_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2534..3397)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAW2_THEAQ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1916_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3483..5087)
DNA (1605bp) protein (535aa)
Adenylate cyclase, family 3 n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5A1_9DELT
family 3 adenylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
family 3 adenylate cyclase
13_1_20cm_2_scaffold_1916_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5150..5389
DNA (240bp) protein (80aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUN8_SYNAS
cytoplasmic protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytoplasmic protein
13_1_20cm_2_scaffold_1916_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5601..6248
DNA (648bp) protein (216aa)
Soluble lytic murein transglycosylase-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_1916_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6410..6685)
DNA (276bp) protein (92aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAX6_THECD
transcriptional coactivator/pterin dehydratase
13_1_20cm_2_scaffold_1916_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6682..7248)
DNA (567bp) protein (189aa)
phosphohydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000364C923
Uncharacterized protein {ECO:0000313|EMBL:CDX26363.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
putative gamma-butyrobetaine dioxygenase
13_1_20cm_2_scaffold_1916_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7245..8210)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000366F435
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_1916_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8212..8616
DNA (405bp) protein (135aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3H0_9FIRM
13_1_20cm_2_scaffold_1916_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

8664..9122
DNA (459bp) protein (153aa)
RNA polymerase sigma factor n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CQ41_9BACL
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_6_Rokubacteria
RNA polymerase subunit sigma-24
13_1_20cm_2_scaffold_1916_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9333..9770
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036CA58A
methylated-DNA--protein-cysteine methyltransferase Tax=CSP1_6_Rokubacteria
methylated-DNA-(protein)-cysteine S-methyltransferase
13_1_20cm_2_scaffold_1916_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10137..11063
DNA (927bp) protein (309aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDM5_ANADF
two component, sigma54 specific, Fis family transcriptional regulator Tax=CSP1_6_Rokubacteria
two component sigma54 specific Fis family transcriptional regulator
13_1_20cm_2_scaffold_1916_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11154..12125)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E80A3 rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
peptide ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_1916_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12130..12651)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000365F9E0
oligopeptide/dipeptide ABC transporter, ATPase subunit; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Oligopeptide/dipeptide ABC transporter, ATPase subunit
Displaying 17 items

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