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13_1_40cm_4_scaffold_10077

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10077_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1..501
DNA (501bp) protein (167aa)
peptidase M48 Ste24p; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RBG_16_Euryarchaeota_68_12_curated
Ste24 endopeptidase (EC:3.4.24.84)
Ste24 endopeptidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C572_SPHTD
13_1_40cm_4_scaffold_10077_trna_1
unknown

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595..701
DNA (107bp)
transferRNA
13_1_40cm_4_scaffold_10077_2
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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783..1169
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Rhodococcus erythropolis RepID=UPI0002F5C362
Uncharacterized protein {ECO:0000313|EMBL:KDQ01369.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
hypothetical protein
13_1_40cm_4_scaffold_10077_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1186..2250)
DNA (1065bp) protein (355aa)
bifunctional phosphoglucose/phosphomannose isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RBG_16_Euryarchaeota_68_12_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Y2_9EURY
13_1_40cm_4_scaffold_10077_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2262..3050
DNA (789bp) protein (263aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K02858 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003741C0A
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_40cm_4_scaffold_10077_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3050..3517
DNA (468bp) protein (156aa)
nucleotidyltransferase n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003693A18
cytidyltransferase-related enzyme Tax=RBG_16_Euryarchaeota_68_12_curated
cytidyltransferase-related enzyme
13_1_40cm_4_scaffold_10077_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3576..4001
DNA (426bp) protein (142aa)
riboflavin synthase alpha chain (EC:2.5.1.-) Tax=RBG_16_Euryarchaeota_68_12_curated
ribC; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IC31_ACIB4
13_1_40cm_4_scaffold_10077_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3998..4429
DNA (432bp) protein (144aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_16_Euryarchaeota_68_12_curated
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RISB_METKA
ribH; 6,7-dimethyl-8-ribityllumazine synthase
13_1_40cm_4_scaffold_10077_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4527..4886
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360600D
Roadblock/LC7 family protein; K07131 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Roadblock/LC7 family protein
13_1_40cm_4_scaffold_10077_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5095..5373
DNA (279bp) protein (93aa)
Roadblock/LC7 family protein; K07131 Tax=RBG_16_Euryarchaeota_68_13_curated
Roadblock/LC7 family protein; K07131
13_1_40cm_4_scaffold_10077_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5370..7478)
DNA (2109bp) protein (703aa)
Methionine--tRNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEN4_ACIB4
methionyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_68_12_curated
methionyl-tRNA synthetase
13_1_40cm_4_scaffold_10077_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7532..9214)
DNA (1683bp) protein (561aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_10077_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(9258..10175)
DNA (918bp) protein (306aa)
DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Euryarchaeota_68_12_curated
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
13_1_40cm_4_scaffold_10077_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(10261..10503)
DNA (243bp) protein (81aa)
Probable DNA repair protein Moth_1489 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIE1_MOOTA
DNA end-binding protein Ku; K10979 DNA end-binding protein Ku Tax=RBG_16_Euryarchaeota_68_12_curated
DNA repair protein
Displaying 14 items

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