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13_1_40cm_4_scaffold_1398

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1398_1
unknown

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3..221
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_1398_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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307..1749
DNA (1443bp) protein (481aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_1398_3
unknown

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2316..2558
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_1398_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2560..10062
DNA (7503bp) protein (2501aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
Putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (Pilus type IV) id=4278837 bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1398_5
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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10059..10838
DNA (780bp) protein (260aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YCY7_9ZZZZ
Tax=RBG_13_Euryarchaeota_57_23_curated
13_1_40cm_4_scaffold_1398_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10835..11176
DNA (342bp) protein (114aa)
DUF2240 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISD2_NATPD
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1398_7
unknown

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comp(11248..11514)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_4_scaffold_1398_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11511..12011)
DNA (501bp) protein (167aa)
Helix-turn-helix domain protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8S4_9EURY
helix-turn-helix domain protein Tax=RBG_16_Euryarchaeota_67_27_curated
helix-turn-helix domain protein
13_1_40cm_4_scaffold_1398_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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12088..13296
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036840DE
proteasome-activating nucleotidase Tax=RBG_16_Euryarchaeota_68_13_curated
proteasome-activating nucleotidase
13_1_40cm_4_scaffold_1398_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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13954..14475
DNA (522bp) protein (174aa)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_1398_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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14557..15108
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369BD15
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1398_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(15105..15809)
DNA (705bp) protein (235aa)
Glycosyl transferase n=1 Tax=uncultured archaeon GZfos35A2 RepID=Q649I4_9ARCH
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_1398_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(15806..17110)
DNA (1305bp) protein (435aa)
Amine oxidase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GGN9_METPE
amine oxidase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
amine oxidase
13_1_40cm_4_scaffold_1398_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(17152..18012)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C546F
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1398_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(18309..19607)
DNA (1299bp) protein (433aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RBG_16_Euryarchaeota_68_12_curated
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZQ6_PYRAB
13_1_40cm_4_scaffold_1398_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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19753..20202
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAI6_ACIB4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1398_17
unknown

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20210..20866
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_4_scaffold_1398_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20863..21414)
DNA (552bp) protein (184aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037365A0
LigT; 2'-5' RNA ligase
13_1_40cm_4_scaffold_1398_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(21419..21808)
DNA (390bp) protein (130aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_1398_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(21819..22490)
DNA (672bp) protein (224aa)
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) (EC:2.7.4.-)
Putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SJ30_9EURY
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 20 items

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