ggKbase home page

13_1_40cm_4_scaffold_14278

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_14278_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..348)
DNA (348bp) protein (116aa)
Membrane protein, MarC family member n=1 Tax=uncultured archaeon RepID=D1JFE0_9ARCH
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_14278_2
unknown

Not on your lists

542..1156
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_4_scaffold_14278_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1194..2348
DNA (1155bp) protein (385aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
hydrophobic amino acid ABC transporter permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
amino acid/amide ABC transporter membrane protein 1, haat family
13_1_40cm_4_scaffold_14278_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2345..3688
DNA (1344bp) protein (448aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL2_9RHIZ
hydrophobic amino acid ABC transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
ABC-type branched-chain amino acid transport system, permease component
13_1_40cm_4_scaffold_14278_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3698..4300
DNA (603bp) protein (201aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PSE2_9EURY
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_14278_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

4297..4422
DNA (126bp) protein (42aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
monosaccharide-transporting ATPase; K01995 branched-chain amino acid transport system ATP-binding protein
13_1_40cm_4_scaffold_14278_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4665..5141)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JGL0_BURP1
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_40cm_4_scaffold_14278_8
unknown

Not on your lists

5674..5880
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_14278_9
unknown

Not on your lists

6475..6663
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_14278_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6814..7206
DNA (393bp) protein (131aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein id=24516538 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein of unknown function (DUF1883)
13_1_40cm_4_scaffold_14278_11
unknown

Not on your lists

comp(7128..7340)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_14278_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7354..8628
DNA (1275bp) protein (425aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I942_METCZ
13_1_40cm_4_scaffold_14278_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8843..9712
DNA (870bp) protein (290aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ41_9EURY
Site-specific recombinase for integration and excision Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Site-specific recombinase for integration and excision
13_1_40cm_4_scaffold_14278_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9716..10111
DNA (396bp) protein (132aa)
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 14 items

View Taxonomy