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13_1_40cm_4_scaffold_14701

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_14701_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2..769
DNA (768bp) protein (256aa)
Signal recognition particle 54 kDa protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAK0_9EURY
signal recognition particle protein Srp54 Tax=RBG_16_Euryarchaeota_68_12_curated
signal recognition particle protein Srp54
13_1_40cm_4_scaffold_14701_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(875..1630)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036653CE
DNA polymerase sliding clamp Tax=RBG_16_Euryarchaeota_68_12_curated
DNA polymerase sliding clamp
13_1_40cm_4_scaffold_14701_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1698..2021)
DNA (324bp) protein (108aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=RBG_16_Euryarchaeota_68_12_curated
rpoM; DNA-directed RNA polymerase subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit M n=2 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RPOM_METTH
13_1_40cm_4_scaffold_14701_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2063..2965)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9B4D
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_14701_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3057..3581)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6CA34
GGDEF domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
diguanylate cyclase and metal dependent phosphohydrolase
13_1_40cm_4_scaffold_14701_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3642..4433)
DNA (792bp) protein (264aa)
lsrF; putative aldolase LsrF (EC:4.1.2.-)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MNA6_9EURY
fructose-bisphosphate aldolase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_14701_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4576..5598)
DNA (1023bp) protein (341aa)
alcohol dehydrogenase; K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RBG_16_Euryarchaeota_68_12_curated
Alcohol dehydrogenase GroES domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YD71_METS5
alcohol dehydrogenase
13_1_40cm_4_scaffold_14701_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5719..6741
DNA (1023bp) protein (341aa)
Sodium/hydrogen exchanger (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B4Y9_9ZZZZ
sodium/hydrogen exchanger Tax=RBG_16_Euryarchaeota_68_13_curated
potassium/proton antiporter
13_1_40cm_4_scaffold_14701_9
unknown

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6738..7046
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_14701_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(7061..7396)
DNA (336bp) protein (112aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGW5_DESAA
cupin Tax=RBG_16_Euryarchaeota_68_13_curated
cupin
13_1_40cm_4_scaffold_14701_trna_2
unknown

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comp(7462..7572)
DNA (111bp)
transferRNA
13_1_40cm_4_scaffold_14701_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7676..8584
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1D899_9ZZZZ
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_14701_trna_1
unknown

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comp(8617..8690)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_14701_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(8812..9054)
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_14701_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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9310..10344
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037438DC
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_14701_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10356..11477
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375006B
type II secretion system protein E; K07332 archaeal flagellar protein FlaI Tax=RBG_16_Euryarchaeota_68_12_curated
type II secretion system protein E
Displaying 16 items

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