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13_1_40cm_4_scaffold_1503

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1503_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(50..997)
DNA (948bp) protein (316aa)
GMP synthase subunit B (EC:6.3.5.2) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E1670
13_1_40cm_4_scaffold_1503_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(999..1469)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364C5DE
phosphoribosylaminoimidazole carboxylase catalytic subunit Tax=RBG_16_Euryarchaeota_68_12_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_40cm_4_scaffold_1503_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1531..1845)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T463_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1503_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1859..2092)
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794C7E
transcriptional regulator Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator
13_1_40cm_4_scaffold_1503_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2185..2601)
DNA (417bp) protein (139aa)
Uncharacterized sugar kinase MJ0406 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y406_METJA
Sugar kinase, ribokinase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
PfkB-type carbohydrate kinase
13_1_40cm_4_scaffold_1503_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3067..3711)
DNA (645bp) protein (215aa)
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87) Tax=RBG_16_Euryarchaeota_68_12_curated
Phosphoserine phosphatase id=4481210 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphatase
13_1_40cm_4_scaffold_1503_7
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3704..4417)
DNA (714bp) protein (238aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=3 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T9W0_ACIB4
2-haloalkanoic acid dehalogenase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_13_Actinobacteria_35_12_curated
HAD-superfamily hydrolase, subfamily IA, variant 1
13_1_40cm_4_scaffold_1503_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(4428..5663)
DNA (1236bp) protein (412aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) Tax=RBG_16_Euryarchaeota_68_13_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003803334
13_1_40cm_4_scaffold_1503_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5728..6093)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94078.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
13_1_40cm_4_scaffold_1503_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6155..8038)
DNA (1884bp) protein (628aa)
Bacterial extracellular solute-binding protein, family 5 n=1 Tax=delta proteobacterium NaphS2 RepID=D8F6B1_9DELT
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_1503_11
unknown

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comp(8547..9011)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_1503_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9013..10245)
DNA (1233bp) protein (411aa)
napA; Na(+)/H(+) antiporter Tax=RBG_16_Euryarchaeota_68_13_curated
Sodium/hydrogen exchanger id=4611463 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
napA; Na(+)/H(+) antiporter
13_1_40cm_4_scaffold_1503_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10354..11055)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369295B
phosphate uptake regulator PhoU; K02039 phosphate transport system protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1503_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(11055..11807)
DNA (753bp) protein (251aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_1_40cm_4_scaffold_1503_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11804..12715)
DNA (912bp) protein (304aa)
Phosphate ABC transporter membrane protein 2, PhoT family n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J119_DESMD
phosphate ABC transporter, permease protein PstA Tax=RBG_16_Euryarchaeota_41_19_curated
phosphate ABC transporter membrane protein
13_1_40cm_4_scaffold_1503_16
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(12712..13389)
DNA (678bp) protein (226aa)
pstC; phosphate transporter permease subunit PstC Tax=RBG_13_Aminicenantes_59_9_curated
Phosphate ABC transporter membrane protein 1, PhoT family id=3269515 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
phosphate ABC transporter permease
13_1_40cm_4_scaffold_1503_17
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13386..13634)
DNA (249bp) protein (83aa)
Putative phosphate ABC transporter permease protein {ECO:0000313|EMBL:BAI88104.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthros
pstC; putative phosphate ABC transporter permease protein
13_1_40cm_4_scaffold_1503_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13661..14809)
DNA (1149bp) protein (383aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL2_NITGG
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_41_19_curated
phosphate ABC transporter, phosphate-binding protein
13_1_40cm_4_scaffold_1503_19
unknown

Not on your lists

comp(14860..14973)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 19 items

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