ggKbase home page

13_1_40cm_4_scaffold_1699

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1699_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2..1111
DNA (1110bp) protein (370aa)
glycine C-acetyltransferase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RBG_16_Euryarchaeota_68_12_curated
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T811_9EURY
13_1_40cm_4_scaffold_1699_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1108..1542)
DNA (435bp) protein (145aa)
ypeA; Acetyltransferase (EC:2.3.1.-) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Acetyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVQ2_9BACT
hypothetical protein
13_1_40cm_4_scaffold_1699_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1547..1882)
DNA (336bp) protein (112aa)
Protein secretion chaperonin CsaA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQ31_9CLOT
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
export-related chaperone CsaA
13_1_40cm_4_scaffold_1699_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2008..2655
DNA (648bp) protein (216aa)
Dinucleotide-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HJH7_9EURY
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RBG_16_Euryarchaeota_68_12_curated
putative NADP oxidoreductase, coenzyme F420-dependent
13_1_40cm_4_scaffold_1699_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2665..3000)
DNA (336bp) protein (112aa)
id=4400131 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein id=4757985 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_4_scaffold_1699_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2946..3134)
DNA (189bp) protein (63aa)
id=4400131 Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_1699_7
unknown

Not on your lists

3152..3577
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_4_scaffold_1699_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3617..6184)
DNA (2568bp) protein (856aa)
peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2] Tax=RBG_16_Euryarchaeota_68_13_curated
Membrane alanyl aminopeptidase id=1250356 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aminopeptidase N
13_1_40cm_4_scaffold_1699_9
unknown

Not on your lists

comp(6227..6433)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_4_scaffold_1699_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

6541..7065
DNA (525bp) protein (175aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_1699_11
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7455..8444
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R2E8_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF86713.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
13_1_40cm_4_scaffold_1699_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8485..9423
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Nucleoside-diphosphate-sugar epimerases (EC:5.1.3.2)
UDP-glucose 4-epimerase id=3055757 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_4_scaffold_1699_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9410..9865)
DNA (456bp) protein (152aa)
Spore coat polysaccharide biosynthesis protein spsL n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML12_9BACT
spsL; Spore coat polysaccharide biosynthesis protein spsL Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
spsL; Spore coat polysaccharide biosynthesis protein spsL
13_1_40cm_4_scaffold_1699_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9922..10974)
DNA (1053bp) protein (351aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036C78CE
dTDP-glucose 4,6-dehydratase
13_1_40cm_4_scaffold_1699_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11057..11917
DNA (861bp) protein (287aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=halophilic archaeon DL31 RepID=G2MQ68_9ARCH
13_1_40cm_4_scaffold_1699_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11914..12987
DNA (1074bp) protein (358aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Euryarchaeota_67_27_curated
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_40cm_4_scaffold_1699_17

Not on your lists

13033..14067
DNA (1035bp) protein (345aa)
SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZK5_METI4
Uncharacterized protein {ECO:0000313|EMBL:KKM94506.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
smtA; SAM-dependent methyltransferase
13_1_40cm_4_scaffold_1699_18
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

14067..14993
DNA (927bp) protein (309aa)
putative glycosyltransferase (EC:2.4.-.-); K07011 Tax=RBG_16_Chloroflexi_57_11_curated
Glycosyl transferase family 2 n=2 Tax=Chloroflexus RepID=A9WBY6_CHLAA
glycosyl transferase family 2 protein
13_1_40cm_4_scaffold_1699_19
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15013..15978)
DNA (966bp) protein (322aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=867904 species="Archae
GDP-mannose 4,6-dehydratase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZN4_METHD
GDP-mannose 4,6-dehydratase
13_1_40cm_4_scaffold_1699_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16150..16650
DNA (501bp) protein (167aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_1699_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16629..17594)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372D321
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_1699_22
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

17846..18613
DNA (768bp) protein (256aa)
Methyltransferase FkbM family n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0Y1_THEPD
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ABL79111.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (st
13_1_40cm_4_scaffold_1699_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18699..20828)
DNA (2130bp) protein (710aa)
Laminin G sub domain 2 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGT8_ROSCS
fibronectin type III domain-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
laminin G domain-containing protein
Displaying 23 items

View Taxonomy