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13_1_40cm_4_scaffold_19527

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_19527_1
unknown

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2..112
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_4_scaffold_19527_2
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(658..1353)
DNA (696bp) protein (232aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT25_METAC
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AAM04058.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_1_40cm_4_scaffold_19527_3
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1350..1574)
DNA (225bp) protein (75aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT25_METAC
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AAM04058.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_1_40cm_4_scaffold_19527_4
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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1708..1947
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7F7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72924.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
protein of unknown function DUF217
13_1_40cm_4_scaffold_19527_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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1944..2336
DNA (393bp) protein (131aa)
Ribonuclease VapC n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LUL2_9EURY
PilT protein domain protein; K07062 Tax=RBG_13_Bathyarchaeota_52_12_curated
PilT protein domain protein
13_1_40cm_4_scaffold_19527_6
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2572..3489)
DNA (918bp) protein (306aa)
Oxalate/formate antiporter n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YY84_LISDA
Oxalate/formate antiporter {ECO:0000313|EMBL:EEZ41215.1}; TaxID=675817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium damse
Permease of the major facilitator superfamily
13_1_40cm_4_scaffold_19527_7
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(3730..4089)
DNA (360bp) protein (120aa)
ABC transporter related n=3 Tax=Thermotoga RepID=B1LCU8_THESQ
Branched-chain amino acid transport ATP-binding protein LivF
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:AIY90447.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;"
13_1_40cm_4_scaffold_19527_8
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4359..5096)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037EC6E3
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_52_11b_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_19527_9
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5099..6034)
DNA (936bp) protein (312aa)
Inner-membrane translocator n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFJ5_ARCPA
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADB58889.1}; Flags: Precursor;; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Ar
13_1_40cm_4_scaffold_19527_10
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6031..6432)
DNA (402bp) protein (134aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MUF6_PYRCJ
amino acid/amide ABC transporter membrane protein 1, HAAT family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABO08273.1}; Flags: Precursor;; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermopr
Displaying 10 items

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