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13_1_40cm_4_scaffold_22479

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_22479_1
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

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comp(3..1127)
DNA (1125bp) protein (375aa)
Carbohydrate binding family 6 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RQ51_METFO
carbohydrate binding family 6 Tax=RBG_13_RIF08_66_14_curated
hypothetical protein
13_1_40cm_4_scaffold_22479_2

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comp(1129..1443)
DNA (315bp) protein (105aa)
Carbohydrate binding family 6 n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GE04_METPE
carbohydrate binding family 6
Marine sediment metagenome DNA, contig: S01H1_S35066 {ECO:0000313|EMBL:GAG37299.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_4_scaffold_22479_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1599..2432)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4462
putative amidohydrolase Tax=RBG_16_Euryarchaeota_68_12_curated
putative amidohydrolase
13_1_40cm_4_scaffold_22479_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2429..2809)
DNA (381bp) protein (127aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_22479_trna_1
unknown

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2829..2901
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_22479_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2984..3646)
DNA (663bp) protein (221aa)
hypothetical protein; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MPX8_9ACTO
hypothetical protein
13_1_40cm_4_scaffold_22479_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3781..4311
DNA (531bp) protein (177aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000382A717
ATP-dependent DNA ligase
13_1_40cm_4_scaffold_22479_7
unknown

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comp(4394..4573)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_22479_8
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4638..5213)
DNA (576bp) protein (192aa)
DNA repair photolyase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T6L2_9EURY
DNA repair photolyase {ECO:0000313|EMBL:EMR74469.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
radical SAM protein
13_1_40cm_4_scaffold_22479_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5695..6138
DNA (444bp) protein (148aa)
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123Y1_POLSJ
cysteine desulfurase activator complex subunit SufB
cysteine desulfurase; K09014 Fe-S cluster assembly protein SufB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 10 items

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