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13_1_40cm_4_scaffold_22525

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_22525_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..1257)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368EB44
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
13_1_40cm_4_scaffold_22525_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1326..2414
DNA (1089bp) protein (363aa)
Calcium/proton exchanger (Cax) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7S0_METCZ
calcium/proton exchanger Cax Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
calcium/proton exchanger (cax)
13_1_40cm_4_scaffold_22525_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2419..3915
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9U0_9ARCH
major facilitator family transporter Tax=RBG_16_Euryarchaeota_67_27_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_22525_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3955..4686
DNA (732bp) protein (244aa)
Methyltransferase type 11 n=1 Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CTX5_9ACTO
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methyltransferase type 11
13_1_40cm_4_scaffold_22525_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4661..5179)
DNA (519bp) protein (173aa)
peptidase zinc-dependent; K06974 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
hypothetical protein; K06974 id=1250605 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_22525_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(5176..6669)
DNA (1494bp) protein (498aa)
tRNA-splicing ligase RtcB n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM66_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_22525_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6704..7750)
DNA (1047bp) protein (349aa)
Agmatinase n=1 Tax=mine drainage metagenome RepID=T0YEH6_9ZZZZ
agmatinase Tax=RBG_16_Euryarchaeota_67_27_curated
agmatinase
13_1_40cm_4_scaffold_22525_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(7785..8171)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
translation initiation factor IF-5A Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
translation initiation factor IF-5A
13_1_40cm_4_scaffold_22525_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(8217..9287)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
rRNA biogenesis protein Nop5/Nop56 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
13_1_40cm_4_scaffold_22525_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9329..10351)
DNA (1023bp) protein (341aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HL00_ACIS0
S-methyl-5-thioribose-1-phosphate isomerase
13_1_40cm_4_scaffold_22525_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10362..10589)
DNA (228bp) protein (76aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_22525_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10591..10827)
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_22525_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10879..11187)
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_22525_trna_1
unknown

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11308..11380
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_22525_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11428..11733)
DNA (306bp) protein (102aa)
Caa(3)-type oxidase, subunit IV id=4083662 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_22525_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11743..12579)
DNA (837bp) protein (279aa)
ctaE; putative cytochrome c oxidase subunit 3 (EC:1.9.3.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_40cm_4_scaffold_22525_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12997..13728
DNA (732bp) protein (244aa)
Small GTP-binding protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ06_ROSCS
small GTP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein
13_1_40cm_4_scaffold_22525_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

13751..13891
DNA (141bp) protein (47aa)
putative RNA methylase Tax=RBG_16_Euryarchaeota_68_13_curated
putative RNA methylase
Displaying 18 items

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