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13_1_40cm_4_scaffold_26399

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_26399_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..585
DNA (585bp) protein (195aa)
RNA-binding protein, containing S1 domain n=2 Tax=Euryarchaeota RepID=M9SH91_9EURY
RNA-binding protein, containing S1 domain Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-binding protein, containing S1 domain
13_1_40cm_4_scaffold_26399_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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692..856
DNA (165bp) protein (55aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_26399_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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976..1986
DNA (1011bp) protein (337aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKU8_METPE
putative molybdopterin biosynthesis MoeB protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
UBA/THIF-type NAD/FAD binding protein
13_1_40cm_4_scaffold_26399_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2595..2879
DNA (285bp) protein (95aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_26399_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2957..3472
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
Putative uncharacterized protein id=5241273 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_4_scaffold_26399_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3507..4292)
DNA (786bp) protein (262aa)
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
UDP diphosphate synthase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAC9_ACIB4
13_1_40cm_4_scaffold_26399_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4494..5255
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003718A44
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_26399_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5414..5662
DNA (249bp) protein (83aa)
Translation initiation factor 1A n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6Z7_9EURY
translation initiation factor 1A (aeIF-1A) Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-1A
13_1_40cm_4_scaffold_26399_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5702..6472
DNA (771bp) protein (257aa)
Putative Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037337F6
Kinase RIO1 family protein
13_1_40cm_4_scaffold_26399_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6474..7010
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4DB5
KH domain protein; K06961 ribosomal RNA assembly protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
KH domain protein
13_1_40cm_4_scaffold_26399_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7059..7718
DNA (660bp) protein (220aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_26399_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7786..10581
DNA (2796bp) protein (932aa)
pyruvate, phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Pyruvate phosphate dikinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6J2_CALAS
ppdK; pyruvate phosphate dikinase
13_1_40cm_4_scaffold_26399_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10597..11370
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000363D7FC
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_26399_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11628..12011
DNA (384bp) protein (128aa)
Uncharacterized protein PH0643 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=Y643_PYRHO
acylpyruvase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
13_1_40cm_4_scaffold_26399_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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12040..12510
DNA (471bp) protein (157aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_26399_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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12807..13436
DNA (630bp) protein (210aa)
tmk; thymidylate kinase (EC:2.7.4.9) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Probable thymidylate kinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U314_9EURY
thymidylate kinase
13_1_40cm_4_scaffold_26399_17
unknown

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comp(13399..13638)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_26399_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13704..14504
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B30B5
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
Displaying 18 items

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