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13_1_40cm_4_scaffold_2875

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2875_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1..732
DNA (732bp) protein (244aa)
Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_7 n=1 Tax=Blastocystis hominis RepID=D8MA31_BLAHO
hypothetical protein, unknown function Tax=RBG_16_Euryarchaeota_67_27_curated
TolA protein
13_1_40cm_4_scaffold_2875_2
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(852..1082)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KFZ83823.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
hypothetical protein
13_1_40cm_4_scaffold_2875_3
unknown

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comp(1543..2217)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_2875_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2733..3173)
DNA (441bp) protein (147aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2875_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3328..5502
DNA (2175bp) protein (725aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RBG_16_Euryarchaeota_68_12_curated
V-type H(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=14425970 bin=bin1_lowGC species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
13_1_40cm_4_scaffold_2875_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(5558..6112)
DNA (555bp) protein (185aa)
Tax=RBG_16_Chloroflexi_64_32_curated
13_1_40cm_4_scaffold_2875_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6308..6907
DNA (600bp) protein (200aa)
DNA-directed RNA polymerase subunit E (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=2 Tax=Methanomassiliicoccus RepID=U5Q1X5_9EURY
13_1_40cm_4_scaffold_2875_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6912..7103
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D5438
hypothetical protein
13_1_40cm_4_scaffold_2875_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7069..7614
DNA (546bp) protein (182aa)
UPF0218 protein Metho_0556 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUN7_METHD
hypothetical protein; K09735 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_2875_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7616..8149
DNA (534bp) protein (178aa)
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7UA95_9EURY
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Euryarchaeota_67_27_curated
SSU ribosomal protein S24e
13_1_40cm_4_scaffold_2875_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8149..8346
DNA (198bp) protein (66aa)
30S ribosomal protein S27ae n=2 Tax=Euryarchaeota RepID=M9SBL1_9EURY
SSU ribosomal protein S27Ae Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
30S ribosomal protein S27ae
13_1_40cm_4_scaffold_2875_trna_1
unknown

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8386..8459
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_2875_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(8540..8716)
DNA (177bp) protein (59aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_2875_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8709..9053)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
Putative uncharacterized protein id=4379350 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
13_1_40cm_4_scaffold_2875_14
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9167..9559
DNA (393bp) protein (131aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRW1_9CYAN
methionine-R-sulfoxide reductase
13_1_40cm_4_scaffold_2875_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9781..11220)
DNA (1440bp) protein (480aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:KCZ71539.1}; EC=1.8.1.4 {ECO:0000313|EMBL:KCZ71539.1};; TaxID=1392998 species="Archaea; Euryar
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E642_METEZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_2875_16

Not on your lists

11424..12155
DNA (732bp) protein (244aa)
Pirin-like protein n=1 Tax=mine drainage metagenome RepID=T0ZEM2_9ZZZZ
Pirin-like protein {ECO:0000313|EMBL:EQD43533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Pirin-like protein
Displaying 17 items

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