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13_1_40cm_4_scaffold_3200

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3200_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2..883
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D16BE
Transcription initiation factor B Tax=RBG_16_Euryarchaeota_68_12_curated
Transcription initiation factor B
13_1_40cm_4_scaffold_3200_2
unknown

Not on your lists

comp(748..1023)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_3200_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1200..1847)
DNA (648bp) protein (216aa)
yddE; isomerase (EC:5.1.-.-); K06998 Tax=RBG_16_Euryarchaeota_68_12_curated
yddE; isomerase (EC:5.1.-.-)
Uncharacterized isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGU5_9BACT
13_1_40cm_4_scaffold_3200_4
unknown

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comp(2125..2772)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_4_scaffold_3200_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2877..4088
DNA (1212bp) protein (404aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_16_Deltaproteobacteria_49_23_curated
aminotransferase n=1 Tax=Zavarzinella formosa RepID=UPI000300179B
class I and II aminotransferase
13_1_40cm_4_scaffold_3200_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4109..5623
DNA (1515bp) protein (505aa)
TIM-barrel fold metal-dependent hydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQC9_9BACT
amidohydrolase; K07047 Tax=RBG_16_Euryarchaeota_68_12_curated
amidohydrolase
13_1_40cm_4_scaffold_3200_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5633..6481)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=uncultured Acidilobus sp. OSP8 RepID=V4KAZ2_9CREN
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
major pilin protein FimA
13_1_40cm_4_scaffold_3200_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6742..7116
DNA (375bp) protein (125aa)
Marine sediment metagenome DNA, contig: S01H1_S40523 Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3200_9

Not on your lists

7129..7515
DNA (387bp) protein (129aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BFP3_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_4_scaffold_3200_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7576..8328
DNA (753bp) protein (251aa)
Haloacid dehalogenase, type II Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3200_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8303..9358)
DNA (1056bp) protein (352aa)
tRNA splicing endonuclease (EC:3.1.27.9) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
tRNA splicing endonuclease (EC:3.1.27.9)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036229E2
13_1_40cm_4_scaffold_3200_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9503..10444
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037599EB
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3200_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10446..11054
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369034B
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
unknown product
13_1_40cm_4_scaffold_3200_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11051..14635)
DNA (3585bp) protein (1195aa)
FG-GAP repeat-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3200_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

15091..16302
DNA (1212bp) protein (404aa)
ATPase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9H9_ACIB4
ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
ATPase
13_1_40cm_4_scaffold_3200_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16304..17203)
DNA (900bp) protein (300aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RBG_16_Euryarchaeota_68_12_curated
Multi-sensor hybrid histidine kinase id=2650861 bin=GWF2_Methylomirabilis_70_14 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_3200_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17340..17549
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3200_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17593..17886
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=unclassified Thermoplasmatales RepID=M7TUN4_9EURY
Uncharacterized protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3200_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17897..18154)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F3EF4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3200_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18511..20340
DNA (1830bp) protein (610aa)
CAAX amino terminal protease family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8V9_9EURY
CAAX amino terminal protease family protein Tax=RBG_16_Euryarchaeota_68_12_curated
CAAX amino terminal protease family protein
13_1_40cm_4_scaffold_3200_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20341..20676)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AH53_NATGS
hypothetical protein; K09736 hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3200_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20827..21762
DNA (936bp) protein (312aa)
DNA polymerase II small subunit (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase II small subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000370ED6E
13_1_40cm_4_scaffold_3200_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21729..22268
DNA (540bp) protein (180aa)
DNA polymerase II small subunit (EC:2.7.7.7) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase D small subunit (DPS) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T825_9EURY
13_1_40cm_4_scaffold_3200_24
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(22318..26289)
DNA (3972bp) protein (1324aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_62_10_curated
Putative uncharacterized protein id=3521809 bin=GWF2_Ignavibacteria_35_20 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_3200_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

26444..27145
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z7L7_9CREN
metallophosphoesterase Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_3200_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

27188..28195
DNA (1008bp) protein (336aa)
Signal peptidase I n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD8_ACIS0
signal peptidase I Tax=RBG_16_Euryarchaeota_67_27_curated
signal peptidase I
13_1_40cm_4_scaffold_3200_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(28188..29039)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037461A6
cdc6; cell division control protein 6 Tax=RBG_16_Euryarchaeota_68_12_curated
cdc6; cell division control protein 6
Displaying 27 items

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