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13_1_40cm_4_scaffold_3363

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3363_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1..174
DNA (174bp) protein (58aa)
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_3363_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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171..1142
DNA (972bp) protein (324aa)
methionine synthase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methionine synthase (EC:2.1.1.14)
methionine synthase n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B60FA4
13_1_40cm_4_scaffold_3363_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1190..1657
DNA (468bp) protein (156aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Putative uncharacterized protein id=1901875 bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_3363_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1695..2003
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TN95_METAC
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_3363_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2168..2581
DNA (414bp) protein (138aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_3363_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2600..3763
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B4A51
CoB--CoM heterodisulfide reductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CoB--CoM heterodisulfide reductase
13_1_40cm_4_scaffold_3363_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3776..4183)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00035CBA4F
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
iron-sulfur cluster assembly accessory protein
13_1_40cm_4_scaffold_3363_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4262..5629
DNA (1368bp) protein (456aa)
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETI0_9BACT
cysteine desulfurase; K09014 Fe-S cluster assembly protein SufB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Iron-regulated ABC transporter membrane component SufB
13_1_40cm_4_scaffold_3363_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5658..6428
DNA (771bp) protein (257aa)
FeS assembly ATPase SufC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1D1_9PROT
sufC; FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
Iron-sulfur cluster assembly ATPase protein SufC
13_1_40cm_4_scaffold_3363_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6425..7783
DNA (1359bp) protein (453aa)
iron ABC transporter permease; K09015 Fe-S cluster assembly protein SufD Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14425452 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
sufD; FeS assembly protein SufD
13_1_40cm_4_scaffold_3363_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7839..8288
DNA (450bp) protein (150aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD56_MYXXD
sufU; iron sulfur cluster assembly protein SufU; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_Euryarchaeota_68_12_curated
NifU family SUF system FeS assembly protein
13_1_40cm_4_scaffold_3363_12
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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8291..9619
DNA (1329bp) protein (443aa)
Fe-S cluster assembly protein SufB n=1 Tax=Streptomyces scabrisporus RepID=UPI00037AC74E
sufB; FeS cluster assembly protein SufB
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=RBG_16_Zixibacteria_40_9_curated
13_1_40cm_4_scaffold_3363_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10251..10856
DNA (606bp) protein (202aa)
cysteine desulfurase SufS; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RBG_16_Euryarchaeota_68_13_curated
cysteine desulfurase n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002D78C09
putative cysteine desulfurase/selenocysteine lyase
13_1_40cm_4_scaffold_3363_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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11258..12187
DNA (930bp) protein (310aa)
cysteine synthase-like protein; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RBG_16_Euryarchaeota_68_13_curated
Cysteine synthase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UR83_ROSS1
cysteine synthase
13_1_40cm_4_scaffold_3363_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13130..14143
DNA (1014bp) protein (338aa)
Molybdopterin biosynthesis protein MoeB n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3Z1_9ARCH
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=RBG_16_Euryarchaeota_68_13_curated
molybdopterin biosynthesis protein MoeB
13_1_40cm_4_scaffold_3363_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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14220..14501
DNA (282bp) protein (94aa)
id=14627917 Tax=RBG_16_Euryarchaeota_68_13_curated
id=14627917 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_3363_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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14543..15112
DNA (570bp) protein (190aa)
hypothetical protein; K09164 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Protein of unknown function (DUF1684) id=14627918 bin=bin7_NC10_sister species=Halobiforma lacisalsi genus=Halobiforma taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_3363_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(15128..15958)
DNA (831bp) protein (277aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
YALI0E23067p; K07901 Ras-related protein Rab-8A Tax=RBG_16_Euryarchaeota_67_27_curated
small GTP-binding protein
13_1_40cm_4_scaffold_3363_trna_1
unknown

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comp(16970..17052)
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_3363_19
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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17303..17935
DNA (633bp) protein (211aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15) Tax=RBG_16_KB1_OP1_55_9_curated
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A880_THEID
alpha,alpha-trehalose-phosphate synthase
Displaying 20 items

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