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13_1_40cm_4_scaffold_3367

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3367_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(2..802)
DNA (801bp) protein (267aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGV2_ACIB4
glycine/serine hydroxymethyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_3367_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(867..2063)
DNA (1197bp) protein (399aa)
Methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_16_Euryarchaeota_67_27_curated
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAW7_ACIB4
13_1_40cm_4_scaffold_3367_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2217..2777
DNA (561bp) protein (187aa)
Transcriptional regulatory protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N014_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
transcription regulator
13_1_40cm_4_scaffold_3367_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2880..3116
DNA (237bp) protein (79aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_3367_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3184..3678)
DNA (495bp) protein (165aa)
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=RBG_16_Euryarchaeota_67_27_curated
Ribonuclease Z n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE30_ARCPA
ribonuclease Z
13_1_40cm_4_scaffold_3367_6
unknown

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comp(4172..4432)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_3367_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4710..6230
DNA (1521bp) protein (507aa)
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
histidine ammonia-lyase n=1 Tax=Thermus islandicus RepID=UPI0003B73903
histidine ammonia-lyase
13_1_40cm_4_scaffold_3367_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6231..10718)
DNA (4488bp) protein (1496aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377C0CF
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_3367_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(10872..11489)
DNA (618bp) protein (206aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=mine drainage metagenome RepID=T1BE45_9ZZZZ
condensin subunit ScpB; K06024 segregation and condensation protein B Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
condensin subunit ScpB
13_1_40cm_4_scaffold_3367_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(11486..11665)
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_3367_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(12335..12517)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F4B81
chromosome segregation protein SMC Tax=RBG_16_Euryarchaeota_68_13_curated
chromosome segregation protein SMC
13_1_40cm_4_scaffold_3367_12
Canis lupus, Canis, Carnivora, Mammalia, Chordata, Metazoa

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comp(12784..13791)
DNA (1008bp) protein (336aa)
Uncharacterized protein (Fragment) n=1 Tax=Canis familiaris RepID=F1PY98_CANFA
COL9A2; collagen, type IX, alpha 2; K08131 collagen, type IX, alpha
Uncharacterized protein {ECO:0000313|Ensembl:ENSCAFP00000004452}; Flags: Fragment;; TaxID=9615 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiath
Displaying 12 items

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