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13_1_40cm_4_scaffold_4077

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4077_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..2388
DNA (2388bp) protein (796aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EB389
13_1_40cm_4_scaffold_4077_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2385..5174
DNA (2790bp) protein (930aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D6AD8
13_1_40cm_4_scaffold_4077_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5177..6691
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364B1D3
DNA-directed RNA polymerase subunit A'' Tax=RBG_16_Euryarchaeota_68_13_curated
DNA-directed RNA polymerase subunit A''
13_1_40cm_4_scaffold_4077_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6936..7361
DNA (426bp) protein (142aa)
NusA protein-like, archaeal n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCN9_9EURY
NusA protein-like, archaeal Tax=RBG_16_Euryarchaeota_68_12_curated
NusA protein-like, archaeal
13_1_40cm_4_scaffold_4077_5
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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7496..8863
DNA (1368bp) protein (456aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0Q6_THEPD
Uncharacterized protein {ECO:0000313|EMBL:AKG39328.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
major facilitator transporter
13_1_40cm_4_scaffold_4077_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9059..11041
DNA (1983bp) protein (661aa)
yqhH; ATP-dependent helicase YqhH (EC:3.6.4.-) Tax=RBG_16_Euryarchaeota_68_13_curated
yqhH; ATP-dependent helicase YqhH (EC:3.6.4.-)
ATP-dependent helicase YqhH n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LWB7_THEPS
13_1_40cm_4_scaffold_4077_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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11038..12510
DNA (1473bp) protein (491aa)
Restriction endonuclease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CW05_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4077_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(12507..13577)
DNA (1071bp) protein (357aa)
Radical SAM domain protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9F0_ACIB4
Radical SAM domain protein; K07129 Tax=RBG_16_Euryarchaeota_68_12_curated
Radical SAM domain protein
13_1_40cm_4_scaffold_4077_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13977..15413
DNA (1437bp) protein (479aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4077_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(15467..15760)
DNA (294bp) protein (98aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4077_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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15844..16653
DNA (810bp) protein (270aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Euryarchaeota_68_12_curated
rsmA; putative ribosomal RNA small subunit methyltransferase A (EC:2.1.1.-)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365CD3F
13_1_40cm_4_scaffold_4077_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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16699..17571
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKN2_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4077_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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17568..18650
DNA (1083bp) protein (361aa)
nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373D5F9
nucleoside-diphosphate-sugar pyrophosphorylase
13_1_40cm_4_scaffold_4077_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18669..19991)
DNA (1323bp) protein (441aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] id=14630643 bin=bin9_gal15 species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
imidazolonepropionase
13_1_40cm_4_scaffold_4077_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(19988..20914)
DNA (927bp) protein (309aa)
Mevalonate kinase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP59_ACIS0
mevalonate kinase Tax=RBG_16_Euryarchaeota_68_12_curated
mevalonate kinase
13_1_40cm_4_scaffold_4077_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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21029..21271
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4077_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21290..23515)
DNA (2226bp) protein (742aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HIG2_ACIS0
AAA family ATPase, CDC48 subfamily Tax=RBG_16_Euryarchaeota_68_12_curated
AAA family ATPase, CDC48 subfamily
13_1_40cm_4_scaffold_4077_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23572..24090)
DNA (519bp) protein (173aa)
Small heat shock protein n=2 Tax=Thermococcus RepID=Q5JEA0_THEKO
Small heat shock protein; K13993 HSP20 family protein Tax=RBG_16_Euryarchaeota_68_12_curated
small heat shock protein
13_1_40cm_4_scaffold_4077_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

24472..24801
DNA (330bp) protein (110aa)
ZPR1-related zinc finger protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYI7_FERPA
ZPR1-related zinc finger protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4077_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24752..24958)
DNA (207bp) protein (69aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6); K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Euryarchaeota_68_12_curated
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365CFE8
13_1_40cm_4_scaffold_4077_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24963..25634)
DNA (672bp) protein (224aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7T8_9EURY
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
putative transcriptional regulator
13_1_40cm_4_scaffold_4077_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

26069..26701
DNA (633bp) protein (211aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4077_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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26704..27414
DNA (711bp) protein (237aa)
RecA superfamily ATPase implicated in signal transduction n=2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V2A5_PYRAB
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
ATPase
13_1_40cm_4_scaffold_4077_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

27416..30508
DNA (3093bp) protein (1031aa)
Putative circadian clock protein, KaiC n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDI1_PYRF1
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
putative circadian clock protein KaiC
Displaying 24 items

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