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13_1_40cm_4_scaffold_4355

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4355_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1..129
DNA (129bp) protein (43aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_4355_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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214..663
DNA (450bp) protein (150aa)
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_4355_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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618..1085
DNA (468bp) protein (156aa)
Extracellular solute-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SMH0_9BACT
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
cjaC; CjaC protein; K02030 polar amino acid transport system substrate-binding protein
13_1_40cm_4_scaffold_4355_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1158..2027
DNA (870bp) protein (290aa)
Putative amino-acid ABC transporter permease protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z452_9CLOT
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
yckA; amino acid ABC transporter permease
13_1_40cm_4_scaffold_4355_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2024..2749
DNA (726bp) protein (242aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RBG_16_Euryarchaeota_67_27_curated
ABC transporter related n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E256_DICTD
ABC transporter-like protein
13_1_40cm_4_scaffold_4355_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3174..3692
DNA (519bp) protein (173aa)
amino acid ABC transporter permease n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255BE5C
polar amino acid ABC transporter inner membrane subunit; K10037 glutamine transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
amino acid ABC transporter permease
13_1_40cm_4_scaffold_4355_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3667..4959)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D3543
OB-fold nucleic acid binding domain protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
OB-fold nucleic acid binding domain protein
13_1_40cm_4_scaffold_4355_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5044..5484
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00038031A5
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_4355_9
unknown

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comp(5613..6005)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_4_scaffold_4355_10
unknown

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comp(6271..6378)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_4355_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6401..6592)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C60B9
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_4_scaffold_4355_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6694..8583)
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C60B9
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_13_curated
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_4_scaffold_4355_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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8690..9004
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0YA40_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_4355_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9044..10096
DNA (1053bp) protein (351aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Deoxyhypusine synthase-like protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YJD3_9BACT
putative deoxyhypusine synthase
13_1_40cm_4_scaffold_4355_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(10105..10569)
DNA (465bp) protein (155aa)
ABC transporter; K14165 dual specificity phosphatase [EC:3.1.3.16 3.1.3.48] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dusP; dual specificity protein phosphatase (EC:3.1.3.16)
Putative phosphatase id=1726346 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
13_1_40cm_4_scaffold_4355_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10699..11250
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035EB7DA
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_4355_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11306..11992
DNA (687bp) protein (229aa)
ribA; riboflavin biosynthesis protein RibA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
riboflavin biosynthesis protein ribA (EC:3.5.4.25)
GTP cyclohydrolase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33CEF
13_1_40cm_4_scaffold_4355_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11928..12419)
DNA (492bp) protein (164aa)
acetyl-CoA carboxylase biotin carboxylase subunit; K13777 geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
pyruvate carboxylase subunit B (EC:4.1.1.3)
Oxaloacetate decarboxylase, alpha subunit n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A103_THESM
13_1_40cm_4_scaffold_4355_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(12391..13854)
DNA (1464bp) protein (488aa)
pyruvate carboxylase subunit A (EC:6.4.1.1); K01959 pyruvate carboxylase subunit A [EC:6.4.1.1] Tax=RBG_16_Euryarchaeota_68_13_curated
Pyruvate carboxyl transferase subunit A (EC:6.4.1.1)
Pyruvate carboxylase subunit A n=2 Tax=Methanosarcina barkeri RepID=Q46C58_METBF
13_1_40cm_4_scaffold_4355_20
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14142..14483
DNA (342bp) protein (114aa)
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
13_1_40cm_4_scaffold_4355_21

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14780..15466
DNA (687bp) protein (229aa)
Predicted acetyl-CoA carboxylase n=1 Tax=uncultured bacterium MedeBAC46A06 RepID=Q4PJD9_9BACT
Predicted acetyl-CoA carboxylase {ECO:0000313|EMBL:AAY82838.1}; TaxID=332275 species="Bacteria; environmental samples.;" source="uncultured bacterium MedeBAC46A06.;"
13_1_40cm_4_scaffold_4355_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(15539..16303)
DNA (765bp) protein (255aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_19FT_COMBO_Eur
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E898_METEZ
Displaying 22 items

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