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13_1_40cm_4_scaffold_4611

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4611_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3..233)
DNA (231bp) protein (77aa)
bcp; peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MKL8_9BACT
peroxiredoxin
13_1_40cm_4_scaffold_4611_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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433..1728
DNA (1296bp) protein (432aa)
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_4611_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1725..2636
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBU7_ACIB4
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase implicated in signal transduction-like protein
13_1_40cm_4_scaffold_4611_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2650..3174
DNA (525bp) protein (175aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKF9_ACIS0
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_40cm_4_scaffold_4611_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3176..4156)
DNA (981bp) protein (327aa)
N-acetyltransferase GCN5 Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_4611_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(4211..5140)
DNA (930bp) protein (310aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_4611_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(5183..6601)
DNA (1419bp) protein (473aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J6M3_MARPK
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_4611_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6598..7557)
DNA (960bp) protein (320aa)
oppD; oligopeptide ABC transporter ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oppD; oligopeptide ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_4611_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7554..8912)
DNA (1359bp) protein (453aa)
ABC transporter; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_4611_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(8917..9528)
DNA (612bp) protein (204aa)
ABC transporter, permease protein, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W0L3_9CYAN
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_4_scaffold_4611_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9525..9929)
DNA (405bp) protein (135aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J6M0_MARPK
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_4_scaffold_4611_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10000..11712)
DNA (1713bp) protein (571aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dppA; peptide ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_4611_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(11822..12841)
DNA (1020bp) protein (340aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease Tax=RBG_16_Euryarchaeota_68_13_curated
flap structure-specific endonuclease
13_1_40cm_4_scaffold_4611_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12901..14103)
DNA (1203bp) protein (401aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B4_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4611_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14198..14665
DNA (468bp) protein (156aa)
Transcription factor zinc-finger n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TDJ4_9EURY
Transcription factor zinc-finger Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_4611_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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14713..15651
DNA (939bp) protein (313aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3B3_9ARCH
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_4611_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15762..16094)
DNA (333bp) protein (111aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_4611_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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16619..17221
DNA (603bp) protein (201aa)
MoaA/NifB/PqqE family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7H3_9EURY
MoaA/NifB/PqqE family protein Tax=RBG_16_Euryarchaeota_67_27_curated
MoaA/NifB/PqqE family protein
Displaying 18 items

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