ggKbase home page

13_1_40cm_4_scaffold_4885

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4885_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..797)
DNA (795bp) protein (265aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Euryarchaeota_68_12_curated
3-isopropylmalate dehydratase large subunit n=2 Tax=mine drainage metagenome RepID=T1CS61_9ZZZZ
3-isopropylmalate dehydratase large subunit
13_1_40cm_4_scaffold_4885_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

959..1891
DNA (933bp) protein (311aa)
DMT superfamily drug/metaboltie permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DMT superfamily drug/metaboltie permease id=1250077 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
DMT superfamily drug/metaboltie permease
13_1_40cm_4_scaffold_4885_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1901..3178)
DNA (1278bp) protein (426aa)
isopropylmalate/citramalate/homocitrate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
(R)-citramalate synthase (EC:2.3.3.13)
Trans-homoaconitate synthase n=1 Tax=mine drainage metagenome RepID=T1BS23_9ZZZZ
13_1_40cm_4_scaffold_4885_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

3251..3781
DNA (531bp) protein (177aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_4885_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3809..4576)
DNA (768bp) protein (256aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Enoyl-CoA hydratase/isomerase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUF6_KYRT2
enoyl-CoA hydratase/isomerase
13_1_40cm_4_scaffold_4885_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4672..6384
DNA (1713bp) protein (571aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NZP9_9FIRM
AMP-dependent synthetase and ligase
13_1_40cm_4_scaffold_4885_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6390..7283)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K917_SACES
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_4885_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7720..8094
DNA (375bp) protein (125aa)
ComEB; deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Deoxycytidylate deaminase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYB6_PELTS
ComEB; deoxycytidylate deaminase
13_1_40cm_4_scaffold_4885_9
uncultured marine crenarchaeote HF4000_ANIW141J13, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8103..8375)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW141J13 RepID=B3T5K1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ07860.1}; TaxID=455577 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
13_1_40cm_4_scaffold_4885_10
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(8435..8872)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
hypothetical protein
hypothetical protein id=5240599 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_4_scaffold_4885_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8863..9987)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003708E6E
histidine biosynthesis protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_4885_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9997..10143)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMB4_DESB2
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_4885_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

10626..10985
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0M1_9ACTO
type 11 methyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_4885_14
unknown

Not on your lists

comp(11031..11132)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 14 items

View Taxonomy