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13_1_40cm_4_scaffold_5346

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5346_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

131..985
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C89D9
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_5346_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1424..2290)
DNA (867bp) protein (289aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Euryarchaeota_67_27_curated
dehydrogenase/reductase sdr family member 4 (EC:1.1.1.184)
Short-chain dehydrogenase/reductase id=1773283 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_5346_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2307..3092)
DNA (786bp) protein (262aa)
Acetyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091D0_STIAD
acetyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_5346_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3231..4568
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035DF04E
replication factor A Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
replication factor A
13_1_40cm_4_scaffold_5346_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4565..5446
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003732310
Glycerol dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Glycerol dehydrogenase
13_1_40cm_4_scaffold_5346_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5686..6102)
DNA (417bp) protein (139aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_5346_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6490..7167
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368BEE9
HTR-like protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
HTR-like protein
13_1_40cm_4_scaffold_5346_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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7177..7926
DNA (750bp) protein (250aa)
circadian clock protein, KaiC (EC:2.7.11.1) Tax=RBG_16_Euryarchaeota_68_13_curated
circadian clock protein, KaiC (EC:2.7.11.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003654B7E
13_1_40cm_4_scaffold_5346_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7975..8562
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003718372
ThiJ/PfpI domain-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
ThiJ/PfpI domain-containing protein
13_1_40cm_4_scaffold_5346_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8735..9460
DNA (726bp) protein (242aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Euryarchaeota_67_27_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003718A8D
13_1_40cm_4_scaffold_5346_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9498..10370
DNA (873bp) protein (291aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGB9_ARCPA
13_1_40cm_4_scaffold_5346_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10442..11551
DNA (1110bp) protein (370aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA synthetase, beta subunit n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TWV4_9EURY
succinyl-CoA synthetase, beta subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_5346_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11634..12422
DNA (789bp) protein (263aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U006_9EURY
succinyl-CoA synthetase, alpha subunit
13_1_40cm_4_scaffold_5346_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13221..14276
DNA (1056bp) protein (352aa)
AIR synthase-like protein domain-containing protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Hydrogenase expression/formation protein HypE id=4023497 bin=GWC2_Proteo_65_14_Ab886 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
AIR synthase-like protein domain-containing protein
13_1_40cm_4_scaffold_5346_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

14312..14929
DNA (618bp) protein (206aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI00035CD987
thiamine-phosphate diphosphorylase
13_1_40cm_4_scaffold_5346_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15035..17425
DNA (2391bp) protein (797aa)
DNA topoisomerase I (EC:5.99.1.2) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
13_1_40cm_4_scaffold_5346_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(17422..18048)
DNA (627bp) protein (209aa)
gloB; beta-lactamase-like protein (EC:3.1.2.6) Tax=RBG_16_Euryarchaeota_68_12_curated
gloB; beta-lactamase-like protein (EC:3.1.2.6)
Beta-lactamase-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAL2_NITGG
13_1_40cm_4_scaffold_5346_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(18083..18361)
DNA (279bp) protein (93aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_5346_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(18379..18630)
DNA (252bp) protein (84aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
ATPase P n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0003170D8E
copper/silver-translocating P-type ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_5346_20
unknown

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18828..19028
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_5346_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(19052..19492)
DNA (441bp) protein (147aa)
Glyoxalase family protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAT7_9CREN id=1247615 bin=RBG9 species=uncultured marine crenarchaeote E48-1C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=RBG9 organism_group=Chloroflexi
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 Tax=RBG_16_Euryarchaeota_68_13_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_5346_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20496..21476
DNA (981bp) protein (327aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_5346_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(21368..22858)
DNA (1491bp) protein (497aa)
phytoene desaturase Tax=RBG_16_Euryarchaeota_68_13_curated
FAD dependent oxidoreductase id=14631624 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
Displaying 23 items

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