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13_1_40cm_4_scaffold_60090

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_60090_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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132..689
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377EE64
glutamine amidotransferase subunit PdxT Tax=RBG_16_Euryarchaeota_67_27_curated
glutamine amidotransferase subunit PdxT
13_1_40cm_4_scaffold_60090_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(686..1960)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W080_UNCMA
hypothetical protein; K08979 putative membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_40cm_4_scaffold_60090_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(1957..2472)
DNA (516bp) protein (172aa)
hypothetical protein; K08979 putative membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_60090_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2472..3209)
DNA (738bp) protein (246aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41); K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Euryarchaeota_67_27_curated
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9F2_ACIB4
13_1_40cm_4_scaffold_60090_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3206..3739)
DNA (534bp) protein (178aa)
Geranylgeranylglycerol-phosphate geranylgeranyltransferase (EC:2.5.1.42)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B9578
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_60090_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3730..3987)
DNA (258bp) protein (86aa)
ubiA2; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase (EC:2.5.1.42)
UbiA prenyltransferase n=1 Tax=mine drainage metagenome RepID=T1B5N1_9ZZZZ
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_60090_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4306..5583
DNA (1278bp) protein (426aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_60090_8
unknown

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6196..6501
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_60090_9
unknown

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6508..6669
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_60090_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7004..7660
DNA (657bp) protein (219aa)
30S ribosomal protein S13 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF005
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Euryarchaeota_67_27_curated
rps13p; 30S ribosomal protein S13
13_1_40cm_4_scaffold_60090_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7665..8291
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9R9_9EURY
rps4p; 30S ribosomal protein S4P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps4p; 30S ribosomal protein S4P
13_1_40cm_4_scaffold_60090_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8294..8677
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6A1_9EURY
rps11p; 30S ribosomal protein S11P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps11p; 30S ribosomal protein S11P
13_1_40cm_4_scaffold_60090_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8679..8900
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA28E
Displaying 13 items

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