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13_1_40cm_4_scaffold_7112

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7112_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(2..418)
DNA (417bp) protein (139aa)
50S ribosomal protein L18 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
rpl18p; 50S ribosomal protein L18P Tax=RBG_16_Euryarchaeota_67_27_curated
rpl18p; 50S ribosomal protein L18P
13_1_40cm_4_scaffold_7112_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(415..882)
DNA (468bp) protein (156aa)
50S ribosomal protein L19e n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL19E_ARCFU
rpl19e; 50S ribosomal protein L19e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
LSU ribosomal protein L19e
13_1_40cm_4_scaffold_7112_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(882..1697)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377A3F2
ribosomal protein L32E Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L32e
13_1_40cm_4_scaffold_7112_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1699..2256)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372DEA1
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Euryarchaeota_68_12_curated
rpl6p; 50S ribosomal protein L6
13_1_40cm_4_scaffold_7112_5

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comp(2253..2642)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S8P
13_1_40cm_4_scaffold_7112_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2651..2797)
DNA (147bp) protein (49aa)
30S ribosomal protein S14 type Z n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Y0_9EURY
rps14P; 30S ribosomal protein S14P Tax=RBG_16_Euryarchaeota_68_12_curated
rps14P; 30S ribosomal protein S14P
13_1_40cm_4_scaffold_7112_7

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comp(2794..3312)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372A27B
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L5P
13_1_40cm_4_scaffold_7112_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3309..3893)
DNA (585bp) protein (195aa)
30S ribosomal protein S4e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) PF6_ACIS0">RepID=L0HPF6_ACIS0
30S ribosomal protein S4e Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein S4E
13_1_40cm_4_scaffold_7112_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4040..4402)
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNP8_ACIS0
ribosomal protein L24p/L26e, archaeal/eukaryotic
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_7112_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(4413..4811)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L14P
13_1_40cm_4_scaffold_7112_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(4808..5254)
DNA (447bp) protein (149aa)
30S ribosomal protein S17 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369E0
archaeal ribosomal protein S17P Tax=RBG_16_Euryarchaeota_68_12_curated
archaeal ribosomal protein S17P
13_1_40cm_4_scaffold_7112_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5258..5509)
DNA (252bp) protein (84aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_16_Euryarchaeota_68_12_curated
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7K9_METSW
ribonuclease P protein component 1
13_1_40cm_4_scaffold_7112_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5506..5754)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000378FEBB
LSU ribosomal protein L29P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L29P
13_1_40cm_4_scaffold_7112_14
unknown

Not on your lists

comp(5755..5883)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

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