ggKbase home page

13_1_40cm_4_scaffold_697

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_697_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Euryarchaeota_68_12_curated
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] id=24559330 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cystathionine beta-synthase
13_1_40cm_4_scaffold_697_trna_2
unknown

Not on your lists

comp(448..520)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_697_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1120..1458
DNA (339bp) protein (113aa)
extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_697_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1552..2844
DNA (1293bp) protein (431aa)
Metal dependent phosphohydrolase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TA10_ACIB4
metal dependent phosphohydrolase; K06885 Tax=RBG_16_Euryarchaeota_68_13_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_697_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2984..4069
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003778FC2
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_40cm_4_scaffold_697_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4206..5315
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_40cm_4_scaffold_697_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5321..5569
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380AC36
secE; preprotein translocase subunit SecE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
secE; preprotein translocase subunit SecE
13_1_40cm_4_scaffold_697_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


5571..6500
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_67_27_curated
Putative transcription antitermination protein NusG
13_1_40cm_4_scaffold_697_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6510..7085)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L5B6_THEU7
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_697_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


7197..7676
DNA (480bp) protein (160aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Euryarchaeota_68_13_curated
50S ribosomal protein L11
13_1_40cm_4_scaffold_697_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(7998..8810)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL6_NITGG
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_697_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8944..9840
DNA (897bp) protein (299aa)
Acetamidase/formamidase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYQ5_9EURY
Acetamidase/formamidase {ECO:0000313|EMBL:EMA37474.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
acetamidase/Formamidase family
13_1_40cm_4_scaffold_697_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


9951..10589
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
LSU ribosomal protein L10Ae (L1p) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L1
13_1_40cm_4_scaffold_697_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


10599..11483
DNA (885bp) protein (295aa)
50S ribosomal protein L10 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY
ribosomal protein L10 Tax=RBG_16_Euryarchaeota_68_13_curated
rplP0; acidic ribosomal protein P0
13_1_40cm_4_scaffold_697_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11506..11814
DNA (309bp) protein (103aa)
50S ribosomal protein L12 n=2 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
50S ribosomal protein L12P; K02869 large subunit ribosomal protein L12 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_4_scaffold_697_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(11868..12188)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXD6_FERPA
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_697_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12222..13238)
DNA (1017bp) protein (339aa)
TIGR01210 family protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD4_ACIS0
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_68_13_curated
TIGR01210 family protein
13_1_40cm_4_scaffold_697_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13282..14550)
DNA (1269bp) protein (423aa)
Pc22g03720 Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_697_trna_1
unknown

Not on your lists

14841..14913
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_697_18
unknown

Not on your lists

comp(14895..15005)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 20 items

View Taxonomy