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13_1_40cm_4_scaffold_8348

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8348_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
3-dehydroquinate synthase II Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_8348_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(165..617)
DNA (453bp) protein (151aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Euryarchaeota_68_13_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTJ2_METAC
13_1_40cm_4_scaffold_8348_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(614..883)
DNA (270bp) protein (90aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Euryarchaeota_68_13_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00037529A4
13_1_40cm_4_scaffold_8348_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(970..1548)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003788A92
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ftsZ; cell division protein FtsZ
13_1_40cm_4_scaffold_8348_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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1956..3170
DNA (1215bp) protein (405aa)
glycine/D-amino acid oxidase, deaminating id=14631966 bin=bin9_gal15 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
glycine/D-amino acid oxidase, deaminating Tax=CSP1_3_Armatimonadetes
FAD dependent oxidoreductase
13_1_40cm_4_scaffold_8348_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3167..3850)
DNA (684bp) protein (228aa)
Ribosomal RNA small subunit methyltransferase Nep1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=NEP1_METTP
ribosome biogenesis protein; K14568 essential for mitotic growth 1 Tax=RBG_16_Euryarchaeota_68_12_curated
ribosome biogenesis protein
13_1_40cm_4_scaffold_8348_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3961..5151
DNA (1191bp) protein (397aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8348_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5238..7553
DNA (2316bp) protein (772aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y247_9FIRM
SMC domain-containing protein; K03546 exonuclease SbcC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SMC domain-containing protein
13_1_40cm_4_scaffold_8348_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7550..8548
DNA (999bp) protein (333aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8348_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8545..9234
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUI3_CHLT3
hypothetical protein; K06915 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_8348_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9264..10037
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2B7_DEHLB
hypothetical protein; K06915 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_8348_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10096..10707
DNA (612bp) protein (204aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8348_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(10717..10995)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_8348_14
unknown

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comp(11007..12158)
DNA (1152bp) protein (384aa)

This feature has no annotations

13_1_40cm_4_scaffold_8348_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12193..13095
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380E632
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_8348_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13168..13920
DNA (753bp) protein (251aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5K4_METCZ
sugar phosphate isomerase/epimerase Tax=RBG_16_Euryarchaeota_67_27_curated
sugar phosphate isomerase/epimerase
13_1_40cm_4_scaffold_8348_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13934..14500)
DNA (567bp) protein (189aa)
Na+/solute symporter, putative n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUQ3_METCG
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RBG_16_Euryarchaeota_68_13_curated
Na+/solute symporter
Displaying 17 items

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