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13_1_40cm_4_scaffold_8372

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8372_1
unknown

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1..96
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_8372_2
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(97..927)
DNA (831bp) protein (277aa)
3-keto-5-aminohexanoate cleavage enzyme n=1 Tax=Laceyella sacchari RepID=UPI0003B6AD1F
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD39049.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
13_1_40cm_4_scaffold_8372_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1053..2669)
DNA (1617bp) protein (539aa)
peptide ABC transporter ATPase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003805514
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dipeptide/oligopeptide ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_8372_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2670..3185)
DNA (516bp) protein (172aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_4_scaffold_8372_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3170..3610)
DNA (441bp) protein (147aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_4_scaffold_8372_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3760..4980
DNA (1221bp) protein (407aa)
MFS transporter n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z4G0_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8372_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5567..5980
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_40cm_4_scaffold_8372_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(5865..7529)
DNA (1665bp) protein (555aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G857_RHIML
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ATPase component dipeptide/oligopeptide/nickel ABC transporter
13_1_40cm_4_scaffold_8372_9
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(7588..8520)
DNA (933bp) protein (311aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RBG_13_Euryarchaeota_57_23_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=24442406 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
13_1_40cm_4_scaffold_8372_10
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(8528..9541)
DNA (1014bp) protein (338aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein id=24442407 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter, permease protein Tax=RBG_13_Euryarchaeota_57_23_curated
ABC transporter permease
13_1_40cm_4_scaffold_8372_11
unknown

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comp(9588..10169)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_4_scaffold_8372_12
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(10268..12199)
DNA (1932bp) protein (644aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PKD domain protein id=24442409 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_40cm_4_scaffold_8372_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12331..13893)
DNA (1563bp) protein (521aa)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Aldehyde dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SL59_9ZZZZ
13_1_40cm_4_scaffold_8372_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(14032..14307)
DNA (276bp) protein (92aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8372_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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14362..14694
DNA (333bp) protein (111aa)
dioxygenase, ferredoxin subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dioxygenase, ferredoxin subunit id=14430310 bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
dioxygenase, ferredoxin subunit
13_1_40cm_4_scaffold_8372_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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14760..15218
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2Q2_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ46608.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_8372_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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15268..16518
DNA (1251bp) protein (417aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028Z9_SOLUE
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase family protein
13_1_40cm_4_scaffold_8372_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(16529..17422)
DNA (894bp) protein (298aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8372_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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17505..18371
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375ECDA
UGMP family protein Tax=RBG_16_Euryarchaeota_67_27_curated
UGMP family protein
Displaying 19 items

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