ggKbase home page

13_1_40cm_4_scaffold_8385

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_8385_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

3..470
DNA (468bp) protein (156aa)
aminotransferase, class V; K00839 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Euryarchaeota_67_27_curated
putative aminotransferase MJ0959 (EC:2.6.1.-)
Aspartate aminotransferase n=1 Tax=mine drainage metagenome RepID=T1BUD2_9ZZZZ
13_1_40cm_4_scaffold_8385_2
unknown

Not on your lists

911..1171
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_8385_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(1176..2156)
DNA (981bp) protein (327aa)
kae1; tRNA N6-adenosine threonylcarbamoyltransferase (EC:2.6.99.4)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375ECDA
YgjD/Kae1/Qri7 family, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA / p53-regulating protein kinase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_8385_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2234..3055
DNA (822bp) protein (274aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_4_scaffold_8385_5
unknown

Not on your lists

comp(3056..3178)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_8385_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3356..3601
DNA (246bp) protein (82aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_8385_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3528..4892)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036B8822
glycosyl transferase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
glycosyltransferase
13_1_40cm_4_scaffold_8385_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4933..5271)
DNA (339bp) protein (113aa)
dioxygenase, ferredoxin subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dioxygenase, ferredoxin subunit id=14626247 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative rieske-type ferredoxin
13_1_40cm_4_scaffold_8385_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5359..5631
DNA (273bp) protein (91aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_8385_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5908..7485
DNA (1578bp) protein (526aa)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NAK0_9ARCH
13_1_40cm_4_scaffold_8385_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7814..8374
DNA (561bp) protein (187aa)
methyltransferase type 11; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HN25_9EURY
type 11 methyltransferase
13_1_40cm_4_scaffold_8385_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8627..8890
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_8385_13
unknown

Not on your lists

comp(8887..9060)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_8385_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9067..9222)
DNA (156bp) protein (52aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 14 items

View Taxonomy