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13_1_40cm_3_scaffold_21708

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_21708_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1..810)
DNA (810bp) protein (270aa)
mvd; diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
diphosphomevalonate decarboxylase
13_1_40cm_3_scaffold_21708_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(830..1234)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TW49_9EURY
archease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_21708_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1305..2057)
DNA (753bp) protein (251aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P4Z3_AROAE
putative radical activating enzyme; K10026 queuosine biosynthesis protein QueE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
radical activating enzyme
13_1_40cm_3_scaffold_21708_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2085..2792)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI00037F892C
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
exsB protein
13_1_40cm_3_scaffold_21708_5
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(2840..3265)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YLS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ91427.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211
13_1_40cm_3_scaffold_21708_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3352..3588)
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_3_scaffold_21708_7
unknown

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3956..4834
DNA (879bp) protein (293aa)

This feature has no annotations

13_1_40cm_3_scaffold_21708_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5013..5264
DNA (252bp) protein (84aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_21708_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5333..5992)
DNA (660bp) protein (220aa)
Diphthamide synthase subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVT3_METMA
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dph2; diphthamide synthase subunit
13_1_40cm_3_scaffold_21708_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5965..6261)
DNA (297bp) protein (99aa)
Diphthamide synthase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GK75_METTF
Suspect SCG annotation. See neighboring gene [13_1_40cm_3_scaffold_21708_9].
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_3_scaffold_21708_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(6367..6495)
DNA (129bp) protein (43aa)
rpl10e; 50S ribosomal protein L10AE; K02866 large subunit ribosomal protein L10e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_21708_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6878..7213
DNA (336bp) protein (112aa)
isopentenyl phosphate kinase (EC:2.7.4.26)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 12 items

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