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13_1_40cm_3_scaffold_3501

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3501_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3..641)
-----------------
DNA (639bp)
protein (213aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_3_scaffold_3501_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(750..2006)
-----------------
DNA (1257bp)
protein (419aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K2L4_STREN
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_3501_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1999..2973)
-----------------
DNA (975bp)
protein (325aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_3_scaffold_3501_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2973..3926)
-----------------
DNA (954bp)
protein (318aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
peptide ABC transporter permease
13_1_40cm_3_scaffold_3501_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3935..4963)
-----------------
DNA (1029bp)
protein (343aa)
peptide ABC transporter permease n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034BA5BB rbh
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
peptide ABC transporter permease
13_1_40cm_3_scaffold_3501_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5006..6793)
-----------------
DNA (1788bp)
protein (596aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dppA; peptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_3501_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6897..7787)
-----------------
DNA (891bp)
protein (297aa)
Flap endonuclease 1 n=1 Tax=Thermofilum sp. 1910b RepID=S5ZDD3_9CREN
flap structure-specific endonuclease Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
Displaying 7 items

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