ggKbase home page

13_1_40cm_3_scaffold_541

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_541_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

141..1331
DNA (1191bp) protein (397aa)
Marine sediment metagenome DNA, contig: S03H2_L03946 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_541_2
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1350..2075
DNA (726bp) protein (242aa)
Tax=GWA1_OP11_43_11
13_1_40cm_3_scaffold_541_3
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2121..2954)
DNA (834bp) protein (278aa)
Polysaccharide deacetylase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GG99_METPE
polysaccharide deacetylase Tax=RBG_16_Chloroflexi_50_9_curated
polysaccharide deacetylase
13_1_40cm_3_scaffold_541_4

Not on your lists

comp(2903..3712)
DNA (810bp) protein (270aa)
methyltransferase type 11 id=41126 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Methyltransferase type 11 {ECO:0000313|EMBL:EKD86441.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_3_scaffold_541_5
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(3897..4769)
DNA (873bp) protein (291aa)
Glycosyl transferase family 2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDL1_ACIB4
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADD08085.1}; Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDY35560.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.
13_1_40cm_3_scaffold_541_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4780..5868)
DNA (1089bp) protein (363aa)
Glycosyl transferase family 2 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS64_HALUD
family 2 glycosyl transferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase family 2
13_1_40cm_3_scaffold_541_7
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5872..6816)
DNA (945bp) protein (315aa)
Putative glycosyltransferase ypjH n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LLX6_METBM
glycosyl transferase, group 1
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABK15442.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta th
13_1_40cm_3_scaffold_541_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6839..8059)
DNA (1221bp) protein (407aa)
Glycosyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PXU0_METMA
glycosyltransferase
Glycosyltransferase (Group I) {ECO:0000313|EMBL:AKB60169.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosar
13_1_40cm_3_scaffold_541_9

Not on your lists

8227..9681
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003789E82
Putative oligosaccharide flippase {ECO:0000313|EMBL:CEG13284.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
Lipopolysaccharide biosynthesis protein WzxC
13_1_40cm_3_scaffold_541_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9678..10781
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003801F65
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase
13_1_40cm_3_scaffold_541_11
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(10857..11690)
DNA (834bp) protein (278aa)
Putative polysaccharide deacetylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWE9_METMA
Polysaccharide deacetylase
Tax=RBG_16_Acidobacteria_64_8_curated
13_1_40cm_3_scaffold_541_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11694..12740)
DNA (1047bp) protein (349aa)
Glycosyltransferase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HH83_METFS
glycosyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyltransferase
13_1_40cm_3_scaffold_541_13
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(12765..14414)
DNA (1650bp) protein (550aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDX4_ACIB4
hypothetical protein Tax=RBG_16_Acidobacteria_64_8_curated
hypothetical protein
13_1_40cm_3_scaffold_541_14
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(14411..15571)
DNA (1161bp) protein (387aa)
Glycosyl transferase group 1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2V4_SPHTD
group 1 glycosyl transferase Tax=RBG_13_Euryarchaeota_57_23_curated
group 1 glycosyl transferase
13_1_40cm_3_scaffold_541_15
Rothia dentocariosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15576..15764)
DNA (189bp) protein (63aa)
maa; maltose O-acetyltransferase (EC:2.3.1.79)
Nodulation protein L {ECO:0000313|EMBL:ADP40079.1}; EC=2.3.1.- {ECO:0000313|EMBL:ADP40079.1};; TaxID=762948 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia d
Nodulation protein L n=1 Tax=Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) RepID=E3H1F2_ROTDC
13_1_40cm_3_scaffold_541_16

Not on your lists

comp(16014..17087)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S8D6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CEG13979.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_541_17
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17149..18129)
DNA (981bp) protein (327aa)
FemAB family n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HCG6_METFS
FemAB family
FemAB family {ECO:0000313|EMBL:AGB02437.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (stra
13_1_40cm_3_scaffold_541_18
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18133..19029)
DNA (897bp) protein (299aa)
Putative xylanase/chitin deacetylase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HIZ3_ACIS0
putative xylanase/chitin deacetylase
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_40cm_3_scaffold_541_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19029..20102)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] Tax=RBG_19FT_C
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC:2.7.8.15)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] id=5241043 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_3_scaffold_541_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20216..20788
DNA (573bp) protein (191aa)
Acetyltransferase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z7Z6_9CREN
hexapaptide repeat-containing transferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
acetyltransferase
13_1_40cm_3_scaffold_541_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20829..21110
DNA (282bp) protein (94aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0SC97_9EURY
DegT/DnrJ/EryC1/StrS aminotransferase
Displaying 21 items

View Taxonomy