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13_1_40cm_3_scaffold_5432

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5432_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2..424
DNA (423bp) protein (141aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M6E9_9CYAN
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
binding-protein-dependent transporter inner membrane component
13_1_40cm_3_scaffold_5432_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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565..1293
DNA (729bp) protein (243aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
oligopeptide ABC transporter permease
13_1_40cm_3_scaffold_5432_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1386..2195
DNA (810bp) protein (270aa)
oppD; oligopeptide ABC transporter ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dipeptide ABC transporter substrate-binding protein
13_1_40cm_3_scaffold_5432_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2192..3499
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003785E1B
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
cell wall oligopeptide ABC transporter (ATP binding protein)
13_1_40cm_3_scaffold_5432_5
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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3708..4295
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E799E
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:CEA13128.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicic
13_1_40cm_3_scaffold_5432_6
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(4336..6246)
DNA (1911bp) protein (637aa)
Acetate/CoA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEM1_PYRF1 rbh
acetate/CoA ligase
Acetate/CoA ligase {ECO:0000313|EMBL:AEM38843.1}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus fumarii (strain DSM 1120
13_1_40cm_3_scaffold_5432_7
unknown

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6405..6839
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_3_scaffold_5432_8
unknown

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7067..7417
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_3_scaffold_5432_9
unknown

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7593..7754
DNA (162bp) protein (54aa)

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Displaying 9 items

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