ggKbase home page

13_1_40cm_3_scaffold_753

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_753_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2..340
DNA (339bp) protein (113aa)
Glutamate-1-semialdehyde aminotransferase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E9U4_9EURY
glutamate-1-semialdehyde aminotransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glutamate-1-semialdehyde aminotransferase
13_1_40cm_3_scaffold_753_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

525..782
DNA (258bp) protein (86aa)
Aldehyde dehydrogenase (NAD) family protein n=2 Tax=Paenibacillus RepID=F5LR36_9BACL
nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
aldehyde dehydrogenase
13_1_40cm_3_scaffold_753_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(829..3489)
DNA (2661bp) protein (887aa)
id=24415558 Tax=RBG_16_Euryarchaeota_67_27_curated
id=24415558 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_3_scaffold_753_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3779..7267)
DNA (3489bp) protein (1163aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B48462
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
PKD domain containing protein
13_1_40cm_3_scaffold_753_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7551..8927
DNA (1377bp) protein (459aa)
Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBL2_FUSMR
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
extracellular solute-binding protein
13_1_40cm_3_scaffold_753_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9132..10994
DNA (1863bp) protein (621aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SUV3_NATMM
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein; K02054 putative spermidine/putrescine transport system perme
binding-protein-dependent transport system inner membrane protein
13_1_40cm_3_scaffold_753_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11140..13914
DNA (2775bp) protein (925aa)
Probable ABC transporter integral membrane protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RYM9_RHOSR
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
ABC transporter
13_1_40cm_3_scaffold_753_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

13921..14637
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG83_ACIB4
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ABC transporter
13_1_40cm_3_scaffold_753_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14713..15867)
DNA (1155bp) protein (385aa)
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] Tax=RBG_16_Euryarchaeota_67_27_curated
spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MMW2_9ARCH rbh
13_1_40cm_3_scaffold_753_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16100..18652)
DNA (2553bp) protein (851aa)
PDK repeat-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
PKD domain-containing protein id=24547293 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PKD domain-containing protein
13_1_40cm_3_scaffold_753_11
unknown

Not on your lists

comp(18836..19372)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_40cm_3_scaffold_753_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

19582..21141
DNA (1560bp) protein (520aa)
Spermidine/putrescine ABC transporter n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SWV9_BACT6
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
spermidine/putrescine ABC transporter
13_1_40cm_3_scaffold_753_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

21145..23088
DNA (1944bp) protein (648aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3G9_9EURY
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein; K02054 putative spermidine/putrescine transport system perme
ABC transporter permease
13_1_40cm_3_scaffold_753_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(23166..24335)
DNA (1170bp) protein (390aa)
saccharopine dehydrogenase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Saccharopine dehydrogenase id=3526264 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
saccharopine dehydrogenase
Displaying 14 items

View Taxonomy