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13_1_40cm_scaffold_14704

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_14704_1
RLO_RIF05_58_11, RIF5, Bacteria

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2..862
DNA (861bp) protein (287aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] T
IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366C3E3
13_1_40cm_scaffold_14704_2
unknown

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comp(859..1017)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_14704_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1069..2820
DNA (1752bp) protein (584aa)
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24578969 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
dppA; peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
peptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_14704_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2991..3431
DNA (441bp) protein (147aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BIY3_PETMO
permease of oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_14704_5
unknown

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comp(3667..3939)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_scaffold_14704_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4005..4805
DNA (801bp) protein (267aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein id=24578967 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter
13_1_40cm_scaffold_14704_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4810..5763
DNA (954bp) protein (318aa)
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_68_13_curated
oppD; oligopeptide ABC transporter ATP-binding protein id=24578966 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oppD; oligopeptide ABC transporter ATP-binding protein
13_1_40cm_scaffold_14704_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5760..7415
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003785E1B
oligopeptide/dipeptide ABC transporter ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
oligopeptide/dipeptide ABC transporter ATPase
Displaying 8 items

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