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13_1_40cm_scaffold_1823

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1823_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3..230)
DNA (228bp) protein (76aa)
site-specific recombinase for integration and excision Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_scaffold_1823_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(234..1061)
DNA (828bp) protein (276aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ41_9EURY
Site-specific recombinase for integration and excision Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
site-specific recombinase for integration and excision
13_1_40cm_scaffold_1823_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1330..2655)
DNA (1326bp) protein (442aa)
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hmgA-1; hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.34 1.1.1.88)
Hydroxymethylglutaryl-CoA reductase, degradative n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I942_METCZ
13_1_40cm_scaffold_1823_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3138..3377
DNA (240bp) protein (80aa)
hypothetical protein; K08982 putative membrane protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_scaffold_1823_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3529..4956
DNA (1428bp) protein (476aa)
Hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRL6_SYNJA
neutral amino acid-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hydrophobic amino acid ABC transporter amino acid-binding protein
13_1_40cm_scaffold_1823_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4982..5761)
DNA (780bp) protein (260aa)
ABC transporter-like protein (EC:3.6.3.27); K11958 neutral amino acid transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUB4_9BACT
livF; ABC transporter
13_1_40cm_scaffold_1823_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5764..6528)
DNA (765bp) protein (255aa)
Putative leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC transporter. [livG] (EC:3.6.3.-)
Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2B1_9FIRM
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_scaffold_1823_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6538..7881)
DNA (1344bp) protein (448aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000376D0B6
hydrophobic amino acid ABC transporter permease Tax=RBG_16_Euryarchaeota_68_13_curated
branched chain amino acid ABC transporter permease
13_1_40cm_scaffold_1823_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7885..9048)
DNA (1164bp) protein (388aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1H0_9FIRM
hydrophobic amino acid ABC transporter permease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
amino acid/amide ABC transporter membrane protein 1, haat family
13_1_40cm_scaffold_1823_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9120..9899
DNA (780bp) protein (260aa)
tRNA(1-methyladenosine) methyltransferase-like methyltransferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9N1_9EURY
tRNA(1-methyladenosine) methyltransferase-related methyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
protein-l-isoaspartate methyltransferase - like protein
13_1_40cm_scaffold_1823_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9930..10370)
DNA (441bp) protein (147aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6D8_METSW
hypothetical protein; K07021 Tax=RBG_16_Euryarchaeota_67_27_curated
RNA-metabolising metallo-beta-lactamase
13_1_40cm_scaffold_1823_12
unknown

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10636..10899
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_1823_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11207..11323)
DNA (117bp) protein (39aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 13 items

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