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13_1_40cm_scaffold_20364

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_20364_1
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..292)
DNA (291bp) protein (97aa)
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CQR59090.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibac
13_1_40cm_scaffold_20364_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(338..1312)
DNA (975bp) protein (325aa)
Diphthamide synthase subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVT3_METMA
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dph2; diphthamide synthase subunit
13_1_40cm_scaffold_20364_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1359..1871)
DNA (513bp) protein (171aa)
50S ribosomal protein L10e n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4H9_9EURY
rpl10e; 50S ribosomal protein L10AE; K02866 large subunit ribosomal protein L10e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl10e; 50S ribosomal protein L10e
13_1_40cm_scaffold_20364_4
unknown

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comp(2017..2514)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_scaffold_20364_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2688..3467
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative archaeal kinase
13_1_40cm_scaffold_20364_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3468..4538
DNA (1071bp) protein (357aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=RBG_16_Euryarchaeota_67_27_curated
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=2 Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
13_1_40cm_scaffold_20364_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4625..5602
DNA (978bp) protein (326aa)
Bifunctional short chain isoprenyl diphosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Euryarchaeota_67_27_curated
Uncharacterized protein n=2 Tax=Bergeyella zoohelcum RepID=K1LC51_9FLAO
fgs; farnesylgeranyl diphosphate synthase
13_1_40cm_scaffold_20364_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(5599..6267)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB Tax=RBG_16_Euryarchaeota_67_27_curated
radB; DNA repair and recombination protein RadB
13_1_40cm_scaffold_20364_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6293..7318)
DNA (1026bp) protein (342aa)
Nmd3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBX2_9EURY
NMD protein affecting ribosome stability and mRNA decay Tax=RBG_16_Euryarchaeota_68_13_curated
Nmd3
13_1_40cm_scaffold_20364_10
unknown

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comp(7324..7872)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_scaffold_20364_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8214..10757)
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQ49_THELI
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
Displaying 11 items

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